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Magnesium in PDB 6bz0: 1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase From Acinetobacter Baumannii in Complex with Fad.

Enzymatic activity of 1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase From Acinetobacter Baumannii in Complex with Fad.

All present enzymatic activity of 1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase From Acinetobacter Baumannii in Complex with Fad.:
1.8.1.4;

Protein crystallography data

The structure of 1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase From Acinetobacter Baumannii in Complex with Fad., PDB code: 6bz0 was solved by G.Minasov, L.Shuvalova, I.Dubrovska, O.Kiryukhina, S.Grimshaw, K.Kwon, W.F.Anderson, K.J.F.Satchell, A.Joachimiak, Center For Structuralgenomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.63 / 1.83
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 57.965, 82.769, 96.262, 80.38, 80.21, 89.49
R / Rfree (%) 17.9 / 22.2

Other elements in 6bz0:

The structure of 1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase From Acinetobacter Baumannii in Complex with Fad. also contains other interesting chemical elements:

Chlorine (Cl) 11 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the 1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase From Acinetobacter Baumannii in Complex with Fad. (pdb code 6bz0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the 1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase From Acinetobacter Baumannii in Complex with Fad., PDB code: 6bz0:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 6bz0

Go back to Magnesium Binding Sites List in 6bz0
Magnesium binding site 1 out of 2 in the 1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase From Acinetobacter Baumannii in Complex with Fad.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of 1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase From Acinetobacter Baumannii in Complex with Fad. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg505

b:36.6
occ:1.00
 O D:HOH888 1.9 42.6 1.0
O A:HOH920 2.0 28.6 1.0
O D:HOH881 2.0 37.3 1.0
O D:HOH635 2.0 34.2 1.0
O A:HOH731 2.2 36.5 1.0
O A:HOH748 2.3 35.3 1.0
O A:HOH951 3.9 36.0 1.0
OD2 A:ASP442 4.1 29.3 1.0
OD1 D:ASP442 4.2 32.2 1.0
O D:HOH687 4.2 36.8 1.0
O A:HOH706 4.3 38.9 1.0
OD1 A:ASP442 4.3 30.7 1.0
CG A:ASP442 4.6 28.6 1.0
O D:HOH772 4.8 35.2 1.0

Magnesium binding site 2 out of 2 in 6bz0

Go back to Magnesium Binding Sites List in 6bz0
Magnesium binding site 2 out of 2 in the 1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase From Acinetobacter Baumannii in Complex with Fad.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of 1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase From Acinetobacter Baumannii in Complex with Fad. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg506

b:47.5
occ:1.00
 O A:HOH641 2.0 41.5 1.0
O A:HOH937 2.1 45.1 1.0
O A:HOH838 2.3 45.2 1.0
OD2 A:ASP213 4.3 45.6 1.0
O A:HOH686 4.3 37.2 1.0
O A:HOH687 4.7 34.2 1.0
OD1 A:ASP213 4.8 47.3 1.0
CG A:ASP213 4.9 46.7 1.0

Reference:

G.Minasov, L.Shuvalova, I.Dubrovska, O.Kiryukhina, S.Grimshaw, K.Kwon, W.F.Anderson, K.J.F.Satchell, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid). 1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase From Acinetobacter Baumannii in Complex with Fad. To Be Published.
Page generated: Mon Sep 30 20:03:21 2024

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