Magnesium in PDB 6c1d: High-Resolution Cryo-Em Structures of Actin-Bound Myosin States Reveal the Mechanism of Myosin Force Sensing

The binding sites of Magnesium atom in the High-Resolution Cryo-Em Structures of Actin-Bound Myosin States Reveal the Mechanism of Myosin Force Sensing (pdb code 6c1d). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 6 binding sites of Magnesium where determined in the High-Resolution Cryo-Em Structures of Actin-Bound Myosin States Reveal the Mechanism of Myosin Force Sensing, PDB code: 6c1d:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6;

Magnesium binding site 1 out of 6 in the High-Resolution Cryo-Em Structures of Actin-Bound Myosin States Reveal the Mechanism of Myosin Force Sensing


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of High-Resolution Cryo-Em Structures of Actin-Bound Myosin States Reveal the Mechanism of Myosin Force Sensing within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:2.4 occ:1.00 O1A A:ADP401 2.7 2.5 1.0 O3B A:ADP401 2.8 2.5 1.0 NE2 A:GLN137 3.0 21.6 1.0 O1B A:ADP401 3.1 2.5 1.0 PB A:ADP401 3.4 2.5 1.0 PA A:ADP401 3.9 2.5 1.0 CA A:GLY156 3.9 20.7 1.0 CD A:GLN137 4.0 21.6 1.0 CG2 A:VAL339 4.0 21.2 1.0 O3A A:ADP401 4.1 2.5 1.0 CA A:GLY13 4.3 26.5 1.0 N A:GLY156 4.6 20.7 1.0 CG A:GLN137 4.6 21.6 1.0 O2A A:ADP401 4.7 2.5 1.0 CG1 A:VAL339 4.7 21.2 1.0 OE1 A:GLN137 4.8 21.6 1.0 O2B A:ADP401 4.8 2.5 1.0 CB A:VAL339 4.9 21.2 1.0 N A:GLY302 4.9 22.9 1.0 N A:GLY13 5.0 26.5 1.0

Magnesium binding site 2 out of 6 in the High-Resolution Cryo-Em Structures of Actin-Bound Myosin States Reveal the Mechanism of Myosin Force Sensing


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of High-Resolution Cryo-Em Structures of Actin-Bound Myosin States Reveal the Mechanism of Myosin Force Sensing within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg402 b:2.1 occ:1.00 O1B B:ADP401 2.9 2.3 1.0 O1A B:ADP401 3.0 2.3 1.0 NE2 B:GLN137 3.1 22.8 1.0 O3B B:ADP401 3.5 2.3 1.0 PB B:ADP401 3.7 2.3 1.0 CA B:GLY156 3.9 20.6 1.0 CG2 B:VAL339 4.0 22.2 1.0 CD B:GLN137 4.0 22.8 1.0 PA B:ADP401 4.1 2.3 1.0 O3A B:ADP401 4.2 2.3 1.0 N B:GLY156 4.4 20.6 1.0 CG B:GLN137 4.6 22.8 1.0 CG1 B:VAL339 4.6 22.2 1.0 CA B:GLY13 4.6 24.0 1.0 N B:GLY302 4.7 22.8 1.0 CB B:VAL339 4.8 22.2 1.0 OE1 B:GLN137 4.8 22.8 1.0 OD2 B:ASP154 4.9 23.3 1.0 O2A B:ADP401 5.0 2.3 1.0

Magnesium binding site 3 out of 6 in the High-Resolution Cryo-Em Structures of Actin-Bound Myosin States Reveal the Mechanism of Myosin Force Sensing


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of High-Resolution Cryo-Em Structures of Actin-Bound Myosin States Reveal the Mechanism of Myosin Force Sensing within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg402 b:0.0 occ:1.00 O1B C:ADP401 2.6 0.0 1.0 O1A C:ADP401 2.9 0.0 1.0 NE2 C:GLN137 3.0 21.6 1.0 O3B C:ADP401 3.5 0.0 1.0 PB C:ADP401 3.5 0.0 1.0 CG2 C:VAL339 3.7 19.7 1.0 PA C:ADP401 3.9 0.0 1.0 CD C:GLN137 4.1 21.6 1.0 O3A C:ADP401 4.1 0.0 1.0 CA C:GLY156 4.2 18.1 1.0 CA C:GLY13 4.4 20.9 1.0 O2A C:ADP401 4.6 0.0 1.0 CG C:GLN137 4.6 21.6 1.0 CG1 C:VAL339 4.6 19.7 1.0 CB C:VAL339 4.6 19.7 1.0 O2B C:ADP401 4.9 0.0 1.0 N C:GLY13 4.9 20.9 1.0 N C:GLY156 4.9 18.1 1.0 OD1 C:ASP11 4.9 22.1 1.0 OD2 C:ASP11 4.9 22.1 1.0 OE1 C:GLN137 4.9 21.6 1.0 N C:GLY302 4.9 20.2 1.0 NZ C:LYS18 5.0 19.4 1.0

Magnesium binding site 4 out of 6 in the High-Resolution Cryo-Em Structures of Actin-Bound Myosin States Reveal the Mechanism of Myosin Force Sensing


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of High-Resolution Cryo-Em Structures of Actin-Bound Myosin States Reveal the Mechanism of Myosin Force Sensing within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg402 b:10.2 occ:1.00 O3B D:ADP401 2.8 10.5 1.0 O1A D:ADP401 3.0 10.5 1.0 NE2 D:GLN137 3.0 42.2 1.0 O1B D:ADP401 3.2 10.5 1.0 PB D:ADP401 3.5 10.5 1.0 CG2 D:VAL339 3.9 41.2 1.0 CD D:GLN137 4.0 42.2 1.0 CA D:GLY156 4.0 27.7 1.0 PA D:ADP401 4.0 10.5 1.0 O3A D:ADP401 4.1 10.5 1.0 CA D:GLY13 4.4 32.9 1.0 CG D:GLN137 4.5 42.2 1.0 CG1 D:VAL339 4.6 41.2 1.0 N D:GLY156 4.6 27.7 1.0 CB D:VAL339 4.7 41.2 1.0 O2A D:ADP401 4.8 10.5 1.0 OE1 D:GLN137 4.8 42.2 1.0 N D:GLY302 4.9 35.4 1.0 O2B D:ADP401 4.9 10.5 1.0

Magnesium binding site 5 out of 6 in the High-Resolution Cryo-Em Structures of Actin-Bound Myosin States Reveal the Mechanism of Myosin Force Sensing


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of High-Resolution Cryo-Em Structures of Actin-Bound Myosin States Reveal the Mechanism of Myosin Force Sensing within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg402 b:13.6 occ:1.00 O1A E:ADP401 2.8 13.8 1.0 O3B E:ADP401 2.8 13.8 1.0 O1B E:ADP401 3.0 13.8 1.0 NE2 E:GLN137 3.2 44.9 1.0 PB E:ADP401 3.5 13.8 1.0 CG2 E:VAL339 3.7 40.6 1.0 PA E:ADP401 3.9 13.8 1.0 CA E:GLY156 4.1 34.3 1.0 O3A E:ADP401 4.1 13.8 1.0 CD E:GLN137 4.2 44.9 1.0 CG1 E:VAL339 4.5 40.6 1.0 CB E:VAL339 4.6 40.6 1.0 N E:GLY302 4.6 41.4 1.0 CG E:GLN137 4.6 44.9 1.0 N E:GLY156 4.6 34.3 1.0 O2A E:ADP401 4.7 13.8 1.0 CA E:GLY13 4.7 35.5 1.0 O2B E:ADP401 4.8 13.8 1.0

Magnesium binding site 6 out of 6 in the High-Resolution Cryo-Em Structures of Actin-Bound Myosin States Reveal the Mechanism of Myosin Force Sensing


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of High-Resolution Cryo-Em Structures of Actin-Bound Myosin States Reveal the Mechanism of Myosin Force Sensing within 5.0Å range: probe atom residue distance (Å) B Occ P:Mg801 b:18.4 occ:1.00 OG1 P:THR115 2.2 50.1 1.0 O3B P:ADP802 2.5 24.7 1.0 O2B P:ADP802 2.6 24.7 1.0 PB P:ADP802 3.0 24.7 1.0 CB P:THR115 3.3 50.1 1.0 O2A P:ADP802 3.5 24.7 1.0 CB P:SER164 3.8 40.1 1.0 OE2 P:GLU150 4.0 46.4 1.0 O3A P:ADP802 4.1 24.7 1.0 N P:THR115 4.1 50.1 1.0 PA P:ADP802 4.1 24.7 1.0 OD2 P:ASP387 4.2 46.4 1.0 O1B P:ADP802 4.3 24.7 1.0 CG2 P:THR115 4.3 50.1 1.0 CA P:THR115 4.3 50.1 1.0 O P:ASN162 4.3 44.5 1.0 ND2 P:ASN154 4.4 41.0 1.0 CA P:SER164 4.5 40.1 1.0 OE1 P:GLU150 4.5 46.4 1.0 O1A P:ADP802 4.5 24.7 1.0 OD1 P:ASP387 4.6 46.4 1.0 N P:SER164 4.6 40.1 1.0 CD P:GLU150 4.7 46.4 1.0 OG P:SER164 4.7 40.1 1.0 CG P:ASP387 4.8 46.4 1.0

A.Mentes, A.Huehn, X.Liu, A.Zwolak, R.Dominguez, H.Shuman, E.M.Ostap, C.V.Sindelar. High-Resolution Cryo-Em Structures of Actin-Bound Myosin States Reveal the Mechanism of Myosin Force Sensing. Proc. Natl. Acad. Sci. V. 115 1292 2018U.S.A..
ISSN: ESSN 1091-6490
PubMed: 29358376
DOI: 10.1073/PNAS.1718316115