Magnesium in PDB 6cau: Udp-N-Acetylmuramate--Alanine Ligase From Acinetobacter Baumannii AB5075-Uw with Amppnp

All present enzymatic activity of Udp-N-Acetylmuramate--Alanine Ligase From Acinetobacter Baumannii AB5075-Uw with Amppnp:
6.3.2.8;

The structure of Udp-N-Acetylmuramate--Alanine Ligase From Acinetobacter Baumannii AB5075-Uw with Amppnp, PDB code: 6cau was solved by P.S.Horanyi, J.Abendroth, D.D.Lorimer, T.E.Edwards, Seattle Structuralgenomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.48 / 2.50
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	82.180, 82.180, 154.900, 90.00, 90.00, 90.00
R / Rfree (%)	16.7 / 19.6

The binding sites of Magnesium atom in the Udp-N-Acetylmuramate--Alanine Ligase From Acinetobacter Baumannii AB5075-Uw with Amppnp (pdb code 6cau). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Udp-N-Acetylmuramate--Alanine Ligase From Acinetobacter Baumannii AB5075-Uw with Amppnp, PDB code: 6cau:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Udp-N-Acetylmuramate--Alanine Ligase From Acinetobacter Baumannii AB5075-Uw with Amppnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Udp-N-Acetylmuramate--Alanine Ligase From Acinetobacter Baumannii AB5075-Uw with Amppnp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:56.6 occ:1.00 O A:HOH606 2.1 50.5 1.0 O1B A:ANP501 2.1 57.0 1.0 O1G A:ANP501 2.1 65.8 1.0 OG1 A:THR134 2.3 51.2 1.0 O A:HOH681 2.3 59.3 1.0 OE2 A:GLU177 2.5 54.5 1.0 CD A:GLU177 3.2 66.1 1.0 PB A:ANP501 3.2 55.3 1.0 OE1 A:GLU177 3.3 65.4 1.0 PG A:ANP501 3.5 69.4 1.0 N3B A:ANP501 3.5 54.9 1.0 CB A:THR134 3.5 48.0 1.0 O1A A:ANP501 3.8 57.5 1.0 N A:THR134 3.9 42.1 1.0 O A:HOH686 4.0 61.9 1.0 CA A:THR134 4.2 42.3 1.0 O3A A:ANP501 4.2 65.4 1.0 O2G A:ANP501 4.3 73.8 1.0 O A:GLY156 4.3 69.8 1.0 O A:HOH670 4.4 85.3 1.0 O2B A:ANP501 4.5 46.8 1.0 CG A:GLU177 4.6 63.4 1.0 PA A:ANP501 4.6 60.4 1.0 O3G A:ANP501 4.6 80.0 1.0 CG2 A:THR134 4.6 37.6 1.0 CB A:LYS133 4.7 43.9 1.0 CE A:LYS133 4.7 38.8 1.0 CA A:GLY156 4.8 58.0 1.0 C A:LYS133 4.9 46.2 1.0 C A:GLY156 4.9 61.7 1.0

Magnesium binding site 2 out of 2 in the Udp-N-Acetylmuramate--Alanine Ligase From Acinetobacter Baumannii AB5075-Uw with Amppnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Udp-N-Acetylmuramate--Alanine Ligase From Acinetobacter Baumannii AB5075-Uw with Amppnp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg503 b:71.0 occ:1.00 O3G A:ANP501 2.1 80.0 1.0 O A:HOH666 2.1 64.1 1.0 O A:HOH698 2.4 83.2 1.0 O A:HOH616 2.6 48.8 1.0 O A:HOH622 2.7 70.5 1.0 PG A:ANP501 3.4 69.4 1.0 O2G A:ANP501 3.9 73.8 1.0 OE1 A:GLU180 4.2 48.5 1.0 O1G A:ANP501 4.4 65.8 1.0 NZ A:LYS133 4.5 42.1 1.0 OD1 A:ASP179 4.7 49.7 1.0 O A:THR130 4.7 49.0 1.0 N3B A:ANP501 4.7 54.9 1.0 O A:HOH686 4.8 61.9 1.0 CD A:GLU180 5.0 48.0 1.0

P.S.Horanyi, J.Abendroth, D.D.Lorimer, T.E.Edwards. Udp-N-Acetylmuramate--Alanine Ligase From Acinetobacter Baumannii AB5075-Uw with Amppnp To Be Published.