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Magnesium in PDB 6cch: uc(Nmr) Data-Driven Model of Gtpase Kras-Gmppnp Tethered to A Nanodisc (E3 State)

Magnesium Binding Sites:

The binding sites of Magnesium atom in the uc(Nmr) Data-Driven Model of Gtpase Kras-Gmppnp Tethered to A Nanodisc (E3 State) (pdb code 6cch). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the uc(Nmr) Data-Driven Model of Gtpase Kras-Gmppnp Tethered to A Nanodisc (E3 State), PDB code: 6cch:

Magnesium binding site 1 out of 1 in 6cch

Go back to Magnesium Binding Sites List in 6cch
Magnesium binding site 1 out of 1 in the uc(Nmr) Data-Driven Model of Gtpase Kras-Gmppnp Tethered to A Nanodisc (E3 State)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of uc(Nmr) Data-Driven Model of Gtpase Kras-Gmppnp Tethered to A Nanodisc (E3 State) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg202

b:10.0
occ:1.00
OD1 B:ASP38 1.6 10.0 1.0
OD2 B:ASP57 1.6 10.0 1.0
OG1 B:THR35 1.7 10.0 1.0
HG1 B:THR35 2.4 10.0 1.0
CG B:ASP38 2.8 10.0 1.0
CB B:THR35 2.8 10.0 1.0
CG B:ASP57 2.8 10.0 1.0
CG2 B:THR35 3.0 10.0 1.0
CB B:ASP38 3.5 10.0 1.0
HG B:SER17 3.6 10.0 1.0
OD1 B:ASP57 3.7 10.0 1.0
OD2 B:ASP38 3.7 10.0 1.0
O1G B:GNP201 3.8 10.0 1.0
CB B:ASP57 3.8 10.0 1.0
OG B:SER17 3.9 10.0 1.0
CB B:SER17 4.0 10.0 1.0
CA B:THR35 4.0 10.0 1.0
O B:ASP57 4.7 10.0 1.0
CA B:ASP38 4.8 10.0 1.0
N B:THR35 4.9 10.0 1.0
H B:ASP38 4.9 10.0 1.0
N B:ASP38 4.9 10.0 1.0
CA B:SER17 5.0 10.0 1.0

Reference:

Z.Fang, C.B.Marshall, T.Nishikawa, A.D.Gossert, J.M.Jansen, W.Jahnke, M.Ikura. Inhibition of K-RAS4B By A Unique Mechanism of Action: Stabilizing Membrane-Dependent Occlusion of the Effector-Binding Site. Cell Chem Biol V. 25 1327 2018.
ISSN: ESSN 2451-9448
PubMed: 30122370
DOI: 10.1016/J.CHEMBIOL.2018.07.009
Page generated: Mon Sep 30 20:30:40 2024

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