Magnesium in PDB 6ccx: uc(Nmr) Data-Driven Model of Gtpase Kras-Gmppnp:CMPD2 Complex Tethered to A Nanodisc

Other elements in 6ccx:

The structure of uc(Nmr) Data-Driven Model of Gtpase Kras-Gmppnp:CMPD2 Complex Tethered to A Nanodisc also contains other interesting chemical elements:

Bromine (Br) 10 atoms
Chlorine (Cl) 10 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the uc(Nmr) Data-Driven Model of Gtpase Kras-Gmppnp:CMPD2 Complex Tethered to A Nanodisc (pdb code 6ccx). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the uc(Nmr) Data-Driven Model of Gtpase Kras-Gmppnp:CMPD2 Complex Tethered to A Nanodisc, PDB code: 6ccx:

Magnesium binding site 1 out of 1 in 6ccx

Go back to Magnesium Binding Sites List in 6ccx
Magnesium binding site 1 out of 1 in the uc(Nmr) Data-Driven Model of Gtpase Kras-Gmppnp:CMPD2 Complex Tethered to A Nanodisc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of uc(Nmr) Data-Driven Model of Gtpase Kras-Gmppnp:CMPD2 Complex Tethered to A Nanodisc within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg236

b:10.0
occ:1.00
OD2 B:ASP57 1.6 10.0 1.0
OD1 B:ASP38 1.6 10.0 1.0
OG1 B:THR35 1.7 10.0 1.0
HG1 B:THR35 2.4 10.0 1.0
CG B:ASP38 2.7 10.0 1.0
CG B:ASP57 2.7 10.0 1.0
CB B:THR35 2.8 10.0 1.0
CG2 B:THR35 3.0 10.0 1.0
CB B:ASP57 3.4 10.0 1.0
OD2 B:ASP38 3.5 10.0 1.0
CB B:ASP38 3.6 10.0 1.0
OD1 B:ASP57 3.7 10.0 1.0
CA B:THR35 3.9 10.0 1.0
HG B:SER17 3.9 10.0 1.0
O B:PRO34 4.1 10.0 1.0
O1G B:GNP235 4.2 10.0 1.0
O B:ASP57 4.2 10.0 1.0
OG B:SER17 4.5 10.0 1.0
C B:ASP57 4.6 10.0 1.0
CA B:ASP57 4.6 10.0 1.0
H B:ILE36 4.7 10.0 1.0
N B:THR35 4.8 10.0 1.0
C B:PRO34 4.8 10.0 1.0
C B:THR35 4.9 10.0 1.0
CA B:ASP38 4.9 10.0 1.0

Reference:

Z.Fang, C.B.Marshall, T.Nishikawa, A.D.Gossert, J.M.Jansen, W.Jahnke, M.Ikura. Inhibition of K-RAS4B By A Unique Mechanism of Action: Stabilizing Membrane-Dependent Occlusion of the Effector-Binding Site. Cell Chem Biol V. 25 1327 2018.
ISSN: ESSN 2451-9448
PubMed: 30122370
DOI: 10.1016/J.CHEMBIOL.2018.07.009
Page generated: Mon Dec 14 22:29:41 2020

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