Magnesium in PDB 6cta: Structure of the Human Cgas-Dna Complex with Atp

All present enzymatic activity of Structure of the Human Cgas-Dna Complex with Atp:
2.7.7.86;

The structure of Structure of the Human Cgas-Dna Complex with Atp, PDB code: 6cta was solved by W.Zhou, A.T.Whiteley, C.C.De Oliveira Mann, B.R.Morehouse, J.J.Mekalanos, P.J.Kranzusch, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.83 / 2.78
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	99.782, 99.782, 236.769, 90.00, 90.00, 120.00
R / Rfree (%)	21.1 / 24.6

The structure of Structure of the Human Cgas-Dna Complex with Atp also contains other interesting chemical elements:

Zinc

(Zn)

1 atom

The binding sites of Magnesium atom in the Structure of the Human Cgas-Dna Complex with Atp (pdb code 6cta). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of the Human Cgas-Dna Complex with Atp, PDB code: 6cta:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of the Human Cgas-Dna Complex with Atp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Human Cgas-Dna Complex with Atp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg602 b:55.1 occ:1.00 OD2 A:ASP227 1.9 82.8 1.0 OE1 A:GLU225 2.0 91.7 1.0 O2B A:ATP604 2.0 59.7 1.0 O2G A:ATP604 2.3 59.0 1.0 O1A A:ATP604 3.0 64.8 1.0 CD A:GLU225 3.1 85.5 1.0 CG A:ASP227 3.1 74.1 1.0 PB A:ATP604 3.3 62.9 1.0 OG A:SER213 3.3 66.2 1.0 PG A:ATP604 3.5 60.1 1.0 OE2 A:GLU225 3.5 87.0 1.0 OD1 A:ASP227 3.7 78.2 1.0 O3B A:ATP604 3.7 63.1 1.0 O3A A:ATP604 3.7 63.2 1.0 O A:GLU225 3.9 69.4 1.0 N A:SER213 3.9 55.1 1.0 O3G A:ATP604 4.0 51.3 1.0 PA A:ATP604 4.0 64.9 1.0 CB A:ASP227 4.3 64.1 1.0 CG A:GLU225 4.3 76.3 1.0 CB A:SER213 4.3 61.1 1.0 C5' A:ATP604 4.4 54.9 1.0 C A:GLU225 4.4 69.6 1.0 CA A:GLY212 4.5 54.2 1.0 CB A:GLU225 4.5 69.0 1.0 O1B A:ATP604 4.6 61.7 1.0 C A:GLY212 4.7 52.4 1.0 N A:ASP227 4.7 57.4 1.0 O5' A:ATP604 4.7 58.6 1.0 CA A:SER213 4.7 57.9 1.0 O1G A:ATP604 4.7 58.1 1.0 C A:PHE226 4.8 56.6 1.0 N A:PHE226 4.9 71.4 1.0 CA A:PHE226 5.0 64.2 1.0 N A:TYR214 5.0 54.3 1.0 CD A:LYS219 5.0 56.5 1.0

Magnesium binding site 2 out of 2 in the Structure of the Human Cgas-Dna Complex with Atp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of the Human Cgas-Dna Complex with Atp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg603 b:65.6 occ:1.00 OD2 A:ASP319 2.4 78.6 1.0 O1A A:ATP604 2.5 64.8 1.0 OD1 A:ASP227 2.9 78.2 1.0 OE2 A:GLU225 3.2 87.0 1.0 PA A:ATP604 3.2 64.9 1.0 O2A A:ATP604 3.2 64.8 1.0 CG A:ASP319 3.4 77.2 1.0 O5' A:ATP604 3.8 58.6 1.0 CB A:ASP319 3.9 74.2 1.0 CG A:ASP227 4.0 74.1 1.0 CG A:PRO306 4.1 84.0 1.0 C5' A:ATP604 4.2 54.9 1.0 CD A:GLU225 4.4 85.5 1.0 OD2 A:ASP227 4.4 82.8 1.0 OD1 A:ASP319 4.4 76.8 1.0 O3A A:ATP604 4.7 63.2 1.0 OE1 A:GLU225 4.9 91.7 1.0 CD A:PRO306 4.9 82.6 1.0

W.Zhou, A.T.Whiteley, C.C.De Oliveira Mann, B.R.Morehouse, R.P.Nowak, E.S.Fischer, N.S.Gray, J.J.Mekalanos, P.J.Kranzusch. Structure of the Human Cgas-Dna Complex Reveals Enhanced Control of Immune Surveillance. Cell V. 174 300 2018.
ISSN: ISSN 1097-4172
PubMed: 30007416
DOI: 10.1016/J.CELL.2018.06.026