Magnesium »
PDB 6dmc-6dp4 »
6dp4 »
Magnesium in PDB 6dp4: Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 20 Mm MG2+ and 75 Mm K+ For 40 S at 21 C
Enzymatic activity of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 20 Mm MG2+ and 75 Mm K+ For 40 S at 21 C
All present enzymatic activity of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 20 Mm MG2+ and 75 Mm K+ For 40 S at 21 C:
3.1.26.4;
3.1.26.4;
Protein crystallography data
The structure of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 20 Mm MG2+ and 75 Mm K+ For 40 S at 21 C, PDB code: 6dp4
was solved by
N.L.Samara,
W.Yang,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 19.92 / 1.37 |
| Space group | C 1 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 81.525, 37.674, 62.050, 90.00, 96.52, 90.00 |
| R / Rfree (%) | 15.7 / 17.6 |
Other elements in 6dp4:
The structure of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 20 Mm MG2+ and 75 Mm K+ For 40 S at 21 C also contains other interesting chemical elements:
| Potassium | (K) | 3 atoms |
| Iodine | (I) | 3 atoms |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 20 Mm MG2+ and 75 Mm K+ For 40 S at 21 C
(pdb code 6dp4). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 20 Mm MG2+ and 75 Mm K+ For 40 S at 21 C, PDB code: 6dp4:
Jump to Magnesium binding site number: 1; 2;
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 20 Mm MG2+ and 75 Mm K+ For 40 S at 21 C, PDB code: 6dp4:
Jump to Magnesium binding site number: 1; 2;
Magnesium binding site 1 out of 2 in 6dp4
Go back to
Magnesium Binding Sites List in 6dp4
Magnesium binding site 1 out
of 2 in the Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 20 Mm MG2+ and 75 Mm K+ For 40 S at 21 C
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 20 Mm MG2+ and 75 Mm K+ For 40 S at 21 C within 5.0Å range:
|
Magnesium binding site 2 out of 2 in 6dp4
Go back to
Magnesium Binding Sites List in 6dp4
Magnesium binding site 2 out
of 2 in the Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 20 Mm MG2+ and 75 Mm K+ For 40 S at 21 C
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 20 Mm MG2+ and 75 Mm K+ For 40 S at 21 C within 5.0Å range:
|
Reference:
N.L.Samara,
W.Yang.
Cation Trafficking Propels Rna Hydrolysis. Nat. Struct. Mol. Biol. V. 25 715 2018.
ISSN: ESSN 1545-9985
PubMed: 30076410
DOI: 10.1038/S41594-018-0099-4
Page generated: Mon Sep 30 23:24:26 2024
ISSN: ESSN 1545-9985
PubMed: 30076410
DOI: 10.1038/S41594-018-0099-4
Last articles
Zn in 9JPJZn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
