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Magnesium in PDB 6ekh: Crystal Structure of Activated Chey From Methanoccocus Maripaludis

Protein crystallography data

The structure of Crystal Structure of Activated Chey From Methanoccocus Maripaludis, PDB code: 6ekh was solved by F.Altegoer, G.Bange, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.67 / 2.65
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 71.332, 71.332, 77.115, 90.00, 90.00, 120.00
R / Rfree (%) 28.4 / 31.5

Other elements in 6ekh:

The structure of Crystal Structure of Activated Chey From Methanoccocus Maripaludis also contains other interesting chemical elements:

Fluorine (F) 3 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Activated Chey From Methanoccocus Maripaludis (pdb code 6ekh). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Activated Chey From Methanoccocus Maripaludis, PDB code: 6ekh:

Magnesium binding site 1 out of 1 in 6ekh

Go back to Magnesium Binding Sites List in 6ekh
Magnesium binding site 1 out of 1 in the Crystal Structure of Activated Chey From Methanoccocus Maripaludis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Activated Chey From Methanoccocus Maripaludis within 5.0Å range:
probe atom residue distance (Å) B Occ
Y:Mg201

b:63.6
occ:1.00
F1 Y:BEF202 2.0 63.2 1.0
OD1 Y:ASP12 2.1 63.9 1.0
O Y:VAL59 2.1 57.4 1.0
OD2 Y:ASP12 2.2 60.1 1.0
OD2 Y:ASP57 2.3 54.9 1.0
CG Y:ASP12 2.4 61.6 1.0
BE Y:BEF202 2.5 59.3 1.0
C Y:VAL59 3.3 61.1 1.0
CG Y:ASP57 3.4 55.5 1.0
CG2 Y:VAL59 3.4 71.6 1.0
F2 Y:BEF202 3.6 67.0 1.0
F3 Y:BEF202 3.6 65.3 1.0
OD1 Y:ASP57 3.8 60.4 1.0
O Y:HOH302 3.8 60.7 1.0
CB Y:ASP12 3.8 54.8 1.0
CA Y:VAL59 4.2 64.3 1.0
N Y:MET60 4.3 60.5 1.0
CB Y:VAL59 4.4 63.7 1.0
OD1 Y:ASP11 4.4 52.8 1.0
CA Y:MET60 4.4 66.0 1.0
N Y:VAL59 4.5 55.0 1.0
CG Y:MET60 4.5 61.3 1.0
N Y:ASP12 4.6 53.6 1.0
CB Y:ASP57 4.6 55.1 1.0
CA Y:ASP12 4.8 54.1 1.0
O Y:HOH303 4.8 63.3 1.0

Reference:

T.E.F.Quax, F.Altegoer, F.Rossi, Z.Li, M.Rodriguez-Franco, F.Kraus, G.Bange, S.V.Albers. Structure and Function of the Archaeal Response Regulator Chey. Proc. Natl. Acad. Sci. V. 115 E1259 2018U.S.A..
ISSN: ESSN 1091-6490
PubMed: 29358409
DOI: 10.1073/PNAS.1716661115
Page generated: Mon Sep 30 23:58:43 2024

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