Magnesium in PDB 6et5: Reaction Centre Light Harvesting Complex 1 From Blc. Virids
Other elements in 6et5:
The structure of Reaction Centre Light Harvesting Complex 1 From Blc. Virids also contains other interesting chemical elements:
Magnesium Binding Sites:
Magnesium binding site 1 out
of 38 in 6et5
Go back to
Magnesium Binding Sites List in 6et5
Magnesium binding site 1 out
of 38 in the Reaction Centre Light Harvesting Complex 1 From Blc. Virids
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Reaction Centre Light Harvesting Complex 1 From Blc. Virids within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:Mg301
b:68.3
occ:1.00
|
MG
|
L:BCB301
|
0.0
|
68.3
|
1.0
|
ND
|
L:BCB301
|
2.0
|
66.1
|
1.0
|
NC
|
L:BCB301
|
2.0
|
67.0
|
1.0
|
NA
|
L:BCB301
|
2.0
|
67.2
|
1.0
|
NB
|
L:BCB301
|
2.0
|
64.8
|
1.0
|
NE2
|
L:HIS173
|
2.4
|
79.5
|
1.0
|
C4D
|
L:BCB301
|
2.9
|
68.7
|
1.0
|
C1A
|
L:BCB301
|
3.0
|
63.1
|
1.0
|
C4A
|
L:BCB301
|
3.0
|
71.7
|
1.0
|
C4B
|
L:BCB301
|
3.1
|
63.0
|
1.0
|
C4C
|
L:BCB301
|
3.1
|
66.1
|
1.0
|
C1C
|
L:BCB301
|
3.1
|
69.1
|
1.0
|
C1D
|
L:BCB301
|
3.1
|
67.3
|
1.0
|
C1B
|
L:BCB301
|
3.1
|
62.7
|
1.0
|
CE1
|
L:HIS173
|
3.3
|
98.6
|
1.0
|
CD2
|
L:HIS173
|
3.4
|
80.0
|
1.0
|
CHA
|
L:BCB301
|
3.4
|
65.3
|
1.0
|
CBB
|
M:BCB406
|
3.5
|
66.8
|
1.0
|
CHB
|
L:BCB301
|
3.5
|
64.0
|
1.0
|
CHC
|
L:BCB301
|
3.5
|
61.8
|
1.0
|
CHD
|
L:BCB301
|
3.6
|
61.9
|
1.0
|
CAB
|
M:BCB406
|
3.6
|
68.5
|
1.0
|
OBB
|
M:BCB406
|
3.8
|
62.9
|
1.0
|
C3D
|
L:BCB301
|
4.1
|
65.9
|
1.0
|
C3B
|
L:BCB301
|
4.3
|
67.5
|
1.0
|
C3C
|
L:BCB301
|
4.3
|
68.5
|
1.0
|
C2A
|
L:BCB301
|
4.3
|
71.0
|
1.0
|
C2D
|
L:BCB301
|
4.3
|
68.7
|
1.0
|
C2B
|
L:BCB301
|
4.4
|
63.4
|
1.0
|
C3A
|
L:BCB301
|
4.4
|
72.4
|
1.0
|
C3B
|
M:BCB406
|
4.4
|
65.4
|
1.0
|
ND1
|
L:HIS173
|
4.4
|
82.0
|
1.0
|
C2C
|
L:BCB301
|
4.5
|
69.2
|
1.0
|
CG
|
L:HIS173
|
4.5
|
74.8
|
1.0
|
CD1
|
L:TRP167
|
4.6
|
88.4
|
1.0
|
NE1
|
L:TRP167
|
4.7
|
77.5
|
1.0
|
CBD
|
L:BCB301
|
4.9
|
64.8
|
1.0
|
|
Magnesium binding site 2 out
of 38 in 6et5
Go back to
Magnesium Binding Sites List in 6et5
Magnesium binding site 2 out
of 38 in the Reaction Centre Light Harvesting Complex 1 From Blc. Virids
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Reaction Centre Light Harvesting Complex 1 From Blc. Virids within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:Mg302
b:82.3
occ:1.00
|
MG
|
L:BCB302
|
0.0
|
82.3
|
1.0
|
NA
|
L:BCB302
|
2.0
|
81.5
|
1.0
|
NC
|
L:BCB302
|
2.0
|
72.4
|
1.0
|
ND
|
L:BCB302
|
2.0
|
81.7
|
1.0
|
NB
|
L:BCB302
|
2.1
|
77.5
|
1.0
|
NE2
|
L:HIS153
|
2.5
|
68.2
|
1.0
|
C4D
|
L:BCB302
|
3.0
|
79.3
|
1.0
|
C1A
|
L:BCB302
|
3.0
|
74.0
|
1.0
|
C4A
|
L:BCB302
|
3.1
|
81.2
|
1.0
|
C1C
|
L:BCB302
|
3.1
|
66.4
|
1.0
|
C4C
|
L:BCB302
|
3.1
|
72.7
|
1.0
|
C4B
|
L:BCB302
|
3.1
|
70.7
|
1.0
|
C1B
|
L:BCB302
|
3.1
|
75.9
|
1.0
|
C1D
|
L:BCB302
|
3.2
|
78.8
|
1.0
|
CE1
|
L:HIS153
|
3.3
|
77.7
|
1.0
|
CHA
|
L:BCB302
|
3.4
|
73.9
|
1.0
|
CHC
|
L:BCB302
|
3.4
|
65.6
|
1.0
|
CHB
|
L:BCB302
|
3.5
|
72.3
|
1.0
|
CD2
|
L:HIS153
|
3.5
|
75.2
|
1.0
|
CHD
|
L:BCB302
|
3.6
|
69.6
|
1.0
|
C3D
|
L:BCB302
|
4.1
|
76.0
|
1.0
|
OBB
|
L:BPB303
|
4.2
|
77.4
|
1.0
|
C3C
|
L:BCB302
|
4.3
|
74.8
|
1.0
|
C2A
|
L:BCB302
|
4.3
|
68.3
|
1.0
|
C3B
|
L:BCB302
|
4.3
|
78.7
|
1.0
|
C2D
|
L:BCB302
|
4.4
|
73.9
|
1.0
|
C2B
|
L:BCB302
|
4.4
|
79.9
|
1.0
|
C3A
|
L:BCB302
|
4.4
|
74.5
|
1.0
|
C2C
|
L:BCB302
|
4.5
|
69.7
|
1.0
|
CE2
|
M:TYR208
|
4.5
|
98.0
|
1.0
|
ND1
|
L:HIS153
|
4.5
|
69.7
|
1.0
|
CG
|
L:HIS153
|
4.6
|
69.4
|
1.0
|
CBA
|
L:BCB302
|
4.8
|
89.7
|
1.0
|
C20
|
L:BPB303
|
4.8
|
0.1
|
1.0
|
CBD
|
L:BCB302
|
4.9
|
75.5
|
1.0
|
CD2
|
L:LEU154
|
5.0
|
70.7
|
1.0
|
|
Magnesium binding site 3 out
of 38 in 6et5
Go back to
Magnesium Binding Sites List in 6et5
Magnesium binding site 3 out
of 38 in the Reaction Centre Light Harvesting Complex 1 From Blc. Virids
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Reaction Centre Light Harvesting Complex 1 From Blc. Virids within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
M:Mg405
b:84.8
occ:1.00
|
MG
|
M:BCB405
|
0.0
|
84.8
|
1.0
|
ND
|
M:BCB405
|
2.0
|
77.8
|
1.0
|
NA
|
M:BCB405
|
2.0
|
82.3
|
1.0
|
NB
|
M:BCB405
|
2.0
|
80.4
|
1.0
|
NC
|
M:BCB405
|
2.1
|
73.2
|
1.0
|
NE2
|
M:HIS180
|
2.4
|
72.0
|
1.0
|
C4D
|
M:BCB405
|
3.0
|
73.1
|
1.0
|
C1A
|
M:BCB405
|
3.0
|
75.0
|
1.0
|
C4A
|
M:BCB405
|
3.0
|
78.8
|
1.0
|
C4B
|
M:BCB405
|
3.1
|
76.0
|
1.0
|
C1B
|
M:BCB405
|
3.1
|
77.3
|
1.0
|
C4C
|
M:BCB405
|
3.1
|
71.0
|
1.0
|
C1D
|
M:BCB405
|
3.1
|
80.4
|
1.0
|
C1C
|
M:BCB405
|
3.1
|
76.1
|
1.0
|
CE1
|
M:HIS180
|
3.3
|
73.4
|
1.0
|
CD2
|
M:HIS180
|
3.4
|
78.4
|
1.0
|
CHA
|
M:BCB405
|
3.4
|
67.1
|
1.0
|
CHB
|
M:BCB405
|
3.4
|
73.6
|
1.0
|
CHC
|
M:BCB405
|
3.5
|
73.8
|
1.0
|
CHD
|
M:BCB405
|
3.5
|
68.6
|
1.0
|
C3D
|
M:BCB405
|
4.1
|
75.8
|
1.0
|
C3B
|
M:BCB405
|
4.3
|
83.6
|
1.0
|
C2B
|
M:BCB405
|
4.3
|
77.5
|
1.0
|
C3A
|
M:BCB405
|
4.3
|
76.0
|
1.0
|
C2A
|
M:BCB405
|
4.3
|
73.3
|
1.0
|
C2D
|
M:BCB405
|
4.3
|
71.9
|
1.0
|
C3C
|
M:BCB405
|
4.3
|
74.1
|
1.0
|
OBB
|
M:BPB407
|
4.4
|
82.5
|
1.0
|
ND1
|
M:HIS180
|
4.5
|
67.1
|
1.0
|
CG
|
M:HIS180
|
4.5
|
69.3
|
1.0
|
C2C
|
M:BCB405
|
4.5
|
72.1
|
1.0
|
CBA
|
M:BCB405
|
4.8
|
93.8
|
1.0
|
CBD
|
M:BCB405
|
4.8
|
71.2
|
1.0
|
CE2
|
L:PHE181
|
4.9
|
83.8
|
1.0
|
CMA
|
M:BCB405
|
4.9
|
70.0
|
1.0
|
C16
|
M:NS5410
|
5.0
|
0.4
|
1.0
|
|
Magnesium binding site 4 out
of 38 in 6et5
Go back to
Magnesium Binding Sites List in 6et5
Magnesium binding site 4 out
of 38 in the Reaction Centre Light Harvesting Complex 1 From Blc. Virids
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Reaction Centre Light Harvesting Complex 1 From Blc. Virids within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
M:Mg406
b:76.8
occ:1.00
|
MG
|
M:BCB406
|
0.0
|
76.8
|
1.0
|
NB
|
M:BCB406
|
2.0
|
64.6
|
1.0
|
ND
|
M:BCB406
|
2.0
|
74.7
|
1.0
|
NA
|
M:BCB406
|
2.0
|
68.7
|
1.0
|
NC
|
M:BCB406
|
2.0
|
74.6
|
1.0
|
NE2
|
M:HIS200
|
2.4
|
80.9
|
1.0
|
C4D
|
M:BCB406
|
3.0
|
71.8
|
1.0
|
C1A
|
M:BCB406
|
3.0
|
67.6
|
1.0
|
C4A
|
M:BCB406
|
3.0
|
70.9
|
1.0
|
C1B
|
M:BCB406
|
3.1
|
66.0
|
1.0
|
C4B
|
M:BCB406
|
3.1
|
65.0
|
1.0
|
C4C
|
M:BCB406
|
3.1
|
77.2
|
1.0
|
C1C
|
M:BCB406
|
3.1
|
73.7
|
1.0
|
C1D
|
M:BCB406
|
3.1
|
70.4
|
1.0
|
CE1
|
M:HIS200
|
3.3
|
97.3
|
1.0
|
CD2
|
M:HIS200
|
3.3
|
91.5
|
1.0
|
CHB
|
M:BCB406
|
3.4
|
66.1
|
1.0
|
CHA
|
M:BCB406
|
3.5
|
69.3
|
1.0
|
CHC
|
M:BCB406
|
3.5
|
61.9
|
1.0
|
CBB
|
L:BCB301
|
3.5
|
63.8
|
1.0
|
CHD
|
M:BCB406
|
3.5
|
70.3
|
1.0
|
CAB
|
L:BCB301
|
3.8
|
71.7
|
1.0
|
OBB
|
L:BCB301
|
4.0
|
68.3
|
1.0
|
C3D
|
M:BCB406
|
4.1
|
71.9
|
1.0
|
C3B
|
M:BCB406
|
4.3
|
65.4
|
1.0
|
C2B
|
M:BCB406
|
4.3
|
67.8
|
1.0
|
C3C
|
M:BCB406
|
4.3
|
79.5
|
1.0
|
C2D
|
M:BCB406
|
4.3
|
69.6
|
1.0
|
C2A
|
M:BCB406
|
4.3
|
66.5
|
1.0
|
C3A
|
M:BCB406
|
4.4
|
67.1
|
1.0
|
ND1
|
M:HIS200
|
4.4
|
87.7
|
1.0
|
C3B
|
L:BCB301
|
4.5
|
67.5
|
1.0
|
C2C
|
M:BCB406
|
4.5
|
73.7
|
1.0
|
CG
|
M:HIS200
|
4.5
|
90.5
|
1.0
|
CD1
|
M:ILE204
|
4.7
|
83.6
|
1.0
|
CBD
|
M:BCB406
|
4.9
|
68.9
|
1.0
|
CAA
|
M:BCB406
|
4.9
|
73.0
|
1.0
|
|
Magnesium binding site 5 out
of 38 in 6et5
Go back to
Magnesium Binding Sites List in 6et5
Magnesium binding site 5 out
of 38 in the Reaction Centre Light Harvesting Complex 1 From Blc. Virids
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Reaction Centre Light Harvesting Complex 1 From Blc. Virids within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
z:Mg101
b:81.7
occ:1.00
|
MG
|
z:BCB101
|
0.0
|
81.7
|
1.0
|
ND
|
z:BCB101
|
2.0
|
76.8
|
1.0
|
NA
|
z:BCB101
|
2.0
|
84.6
|
1.0
|
NB
|
z:BCB101
|
2.1
|
76.6
|
1.0
|
NC
|
z:BCB101
|
2.1
|
78.7
|
1.0
|
NE2
|
z:HIS36
|
2.5
|
79.6
|
1.0
|
C4D
|
z:BCB101
|
2.9
|
81.9
|
1.0
|
C4A
|
z:BCB101
|
3.0
|
90.1
|
1.0
|
C1A
|
z:BCB101
|
3.1
|
81.8
|
1.0
|
C4C
|
z:BCB101
|
3.1
|
80.7
|
1.0
|
C1B
|
z:BCB101
|
3.1
|
77.6
|
1.0
|
C1C
|
z:BCB101
|
3.1
|
80.1
|
1.0
|
C4B
|
z:BCB101
|
3.1
|
76.3
|
1.0
|
CE1
|
z:HIS36
|
3.1
|
78.9
|
1.0
|
C1D
|
z:BCB101
|
3.2
|
74.0
|
1.0
|
CHB
|
z:BCB101
|
3.4
|
79.2
|
1.0
|
CHA
|
z:BCB101
|
3.5
|
79.2
|
1.0
|
CHC
|
z:BCB101
|
3.5
|
79.5
|
1.0
|
CHD
|
z:BCB101
|
3.6
|
68.3
|
1.0
|
CD2
|
z:HIS36
|
3.7
|
81.4
|
1.0
|
CD1
|
2:ILE23
|
3.9
|
0.1
|
1.0
|
C3D
|
z:BCB101
|
4.1
|
82.2
|
1.0
|
CBB
|
4:BCB101
|
4.1
|
85.3
|
1.0
|
CMD
|
1:BCB101
|
4.2
|
85.7
|
1.0
|
CMB
|
4:BCB101
|
4.2
|
73.2
|
1.0
|
C2D
|
z:BCB101
|
4.3
|
77.2
|
1.0
|
C3C
|
z:BCB101
|
4.3
|
78.5
|
1.0
|
C3A
|
z:BCB101
|
4.4
|
91.5
|
1.0
|
C3B
|
z:BCB101
|
4.4
|
75.2
|
1.0
|
C2B
|
z:BCB101
|
4.4
|
75.0
|
1.0
|
C2A
|
z:BCB101
|
4.4
|
87.1
|
1.0
|
ND1
|
z:HIS36
|
4.4
|
74.3
|
1.0
|
C2C
|
z:BCB101
|
4.5
|
74.6
|
1.0
|
CG
|
z:HIS36
|
4.7
|
80.4
|
1.0
|
CG2
|
2:ILE23
|
4.8
|
93.5
|
1.0
|
CBD
|
z:BCB101
|
4.9
|
87.7
|
1.0
|
C2B
|
4:BCB101
|
4.9
|
73.9
|
1.0
|
|
Magnesium binding site 6 out
of 38 in 6et5
Go back to
Magnesium Binding Sites List in 6et5
Magnesium binding site 6 out
of 38 in the Reaction Centre Light Harvesting Complex 1 From Blc. Virids
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Reaction Centre Light Harvesting Complex 1 From Blc. Virids within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg101
b:78.3
occ:1.00
|
MG
|
1:BCB101
|
0.0
|
78.3
|
1.0
|
ND
|
1:BCB101
|
2.0
|
75.6
|
1.0
|
NB
|
1:BCB101
|
2.0
|
80.8
|
1.0
|
NA
|
1:BCB101
|
2.0
|
84.4
|
1.0
|
NC
|
1:BCB101
|
2.1
|
82.3
|
1.0
|
NE2
|
1:HIS37
|
2.3
|
71.4
|
1.0
|
C4D
|
1:BCB101
|
2.9
|
72.4
|
1.0
|
C4A
|
1:BCB101
|
3.0
|
87.3
|
1.0
|
C1A
|
1:BCB101
|
3.0
|
80.5
|
1.0
|
CE1
|
1:HIS37
|
3.1
|
70.8
|
1.0
|
C4C
|
1:BCB101
|
3.1
|
79.5
|
1.0
|
C1B
|
1:BCB101
|
3.1
|
84.9
|
1.0
|
C1D
|
1:BCB101
|
3.1
|
75.9
|
1.0
|
C4B
|
1:BCB101
|
3.1
|
82.6
|
1.0
|
C1C
|
1:BCB101
|
3.1
|
82.8
|
1.0
|
CD2
|
1:HIS37
|
3.4
|
71.2
|
1.0
|
CHB
|
1:BCB101
|
3.4
|
83.5
|
1.0
|
CHA
|
1:BCB101
|
3.5
|
75.0
|
1.0
|
CHC
|
1:BCB101
|
3.5
|
78.3
|
1.0
|
CHD
|
1:BCB101
|
3.5
|
75.2
|
1.0
|
CBB
|
w:BCB101
|
3.9
|
90.7
|
1.0
|
C3D
|
1:BCB101
|
4.1
|
77.8
|
1.0
|
CMB
|
w:BCB101
|
4.1
|
84.4
|
1.0
|
ND1
|
1:HIS37
|
4.3
|
81.0
|
1.0
|
C2D
|
1:BCB101
|
4.3
|
80.9
|
1.0
|
C3A
|
1:BCB101
|
4.3
|
86.5
|
1.0
|
CMD
|
z:BCB101
|
4.3
|
74.9
|
1.0
|
C3C
|
1:BCB101
|
4.3
|
76.6
|
1.0
|
C3B
|
1:BCB101
|
4.4
|
82.0
|
1.0
|
C2A
|
1:BCB101
|
4.4
|
74.7
|
1.0
|
C2B
|
1:BCB101
|
4.4
|
83.7
|
1.0
|
CG
|
1:HIS37
|
4.4
|
81.2
|
1.0
|
C2C
|
1:BCB101
|
4.5
|
81.5
|
1.0
|
CD1
|
z:ILE35
|
4.6
|
0.5
|
1.0
|
CAB
|
w:BCB101
|
4.7
|
85.4
|
1.0
|
C2B
|
w:BCB101
|
4.7
|
80.0
|
1.0
|
CBD
|
1:BCB101
|
4.9
|
75.1
|
1.0
|
C3B
|
w:BCB101
|
4.9
|
78.9
|
1.0
|
|
Magnesium binding site 7 out
of 38 in 6et5
Go back to
Magnesium Binding Sites List in 6et5
Magnesium binding site 7 out
of 38 in the Reaction Centre Light Harvesting Complex 1 From Blc. Virids
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Reaction Centre Light Harvesting Complex 1 From Blc. Virids within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Mg101
b:91.5
occ:1.00
|
MG
|
F:BCB101
|
0.0
|
91.5
|
1.0
|
ND
|
F:BCB101
|
2.0
|
87.6
|
1.0
|
NA
|
F:BCB101
|
2.0
|
93.2
|
1.0
|
NB
|
F:BCB101
|
2.1
|
87.3
|
1.0
|
NC
|
F:BCB101
|
2.1
|
87.7
|
1.0
|
NE2
|
F:HIS36
|
2.5
|
78.3
|
1.0
|
C4D
|
F:BCB101
|
3.0
|
91.2
|
1.0
|
C4A
|
F:BCB101
|
3.0
|
93.7
|
1.0
|
C1A
|
F:BCB101
|
3.0
|
92.4
|
1.0
|
C4B
|
F:BCB101
|
3.1
|
86.6
|
1.0
|
C4C
|
F:BCB101
|
3.1
|
86.9
|
1.0
|
C1D
|
F:BCB101
|
3.1
|
82.0
|
1.0
|
C1B
|
F:BCB101
|
3.1
|
93.0
|
1.0
|
C1C
|
F:BCB101
|
3.2
|
86.3
|
1.0
|
CE1
|
F:HIS36
|
3.2
|
83.8
|
1.0
|
CHB
|
F:BCB101
|
3.4
|
92.8
|
1.0
|
CHC
|
F:BCB101
|
3.5
|
78.5
|
1.0
|
CHA
|
F:BCB101
|
3.5
|
89.2
|
1.0
|
CHD
|
F:BCB101
|
3.6
|
77.0
|
1.0
|
CD2
|
F:HIS36
|
3.7
|
90.0
|
1.0
|
CD1
|
I:ILE23
|
3.8
|
0.2
|
1.0
|
CMD
|
G:BCB101
|
4.1
|
0.9
|
1.0
|
C3D
|
F:BCB101
|
4.1
|
95.2
|
1.0
|
CBB
|
N:BCB101
|
4.3
|
93.8
|
1.0
|
CMB
|
N:BCB101
|
4.3
|
92.2
|
1.0
|
C2D
|
F:BCB101
|
4.3
|
90.8
|
1.0
|
C3B
|
F:BCB101
|
4.3
|
91.0
|
1.0
|
C3A
|
F:BCB101
|
4.3
|
95.1
|
1.0
|
C2B
|
F:BCB101
|
4.4
|
84.6
|
1.0
|
C3C
|
F:BCB101
|
4.4
|
92.2
|
1.0
|
C2A
|
F:BCB101
|
4.4
|
96.3
|
1.0
|
ND1
|
F:HIS36
|
4.4
|
87.7
|
1.0
|
C2C
|
F:BCB101
|
4.6
|
88.7
|
1.0
|
CG
|
F:HIS36
|
4.7
|
90.3
|
1.0
|
CG2
|
I:ILE23
|
4.8
|
99.2
|
1.0
|
CBD
|
F:BCB101
|
5.0
|
99.0
|
1.0
|
C2B
|
N:BCB101
|
5.0
|
94.5
|
1.0
|
|
Magnesium binding site 8 out
of 38 in 6et5
Go back to
Magnesium Binding Sites List in 6et5
Magnesium binding site 8 out
of 38 in the Reaction Centre Light Harvesting Complex 1 From Blc. Virids
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Reaction Centre Light Harvesting Complex 1 From Blc. Virids within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
K:Mg101
b:80.4
occ:1.00
|
MG
|
K:BCB101
|
0.0
|
80.4
|
1.0
|
ND
|
K:BCB101
|
2.0
|
83.3
|
1.0
|
NA
|
K:BCB101
|
2.0
|
93.2
|
1.0
|
NB
|
K:BCB101
|
2.1
|
80.0
|
1.0
|
NC
|
K:BCB101
|
2.1
|
83.3
|
1.0
|
NE2
|
K:HIS36
|
2.5
|
73.1
|
1.0
|
C4D
|
K:BCB101
|
3.0
|
87.3
|
1.0
|
C1A
|
K:BCB101
|
3.0
|
89.0
|
1.0
|
C4A
|
K:BCB101
|
3.0
|
91.6
|
1.0
|
C4B
|
K:BCB101
|
3.1
|
77.2
|
1.0
|
CE1
|
K:HIS36
|
3.1
|
79.4
|
1.0
|
C4C
|
K:BCB101
|
3.1
|
83.6
|
1.0
|
C1B
|
K:BCB101
|
3.1
|
82.9
|
1.0
|
C1D
|
K:BCB101
|
3.2
|
84.7
|
1.0
|
C1C
|
K:BCB101
|
3.2
|
82.3
|
1.0
|
CHB
|
K:BCB101
|
3.4
|
84.9
|
1.0
|
CHA
|
K:BCB101
|
3.5
|
84.5
|
1.0
|
CHC
|
K:BCB101
|
3.5
|
71.8
|
1.0
|
CHD
|
K:BCB101
|
3.6
|
78.2
|
1.0
|
CD2
|
K:HIS36
|
3.7
|
75.9
|
1.0
|
CD1
|
O:ILE23
|
3.8
|
98.5
|
1.0
|
CMB
|
Q:BCB101
|
4.0
|
87.2
|
1.0
|
C3D
|
K:BCB101
|
4.1
|
89.1
|
1.0
|
CMD
|
N:BCB101
|
4.2
|
95.9
|
1.0
|
CBB
|
Q:BCB101
|
4.2
|
89.9
|
1.0
|
C3B
|
K:BCB101
|
4.3
|
83.9
|
1.0
|
C2A
|
K:BCB101
|
4.3
|
87.4
|
1.0
|
C3A
|
K:BCB101
|
4.3
|
89.6
|
1.0
|
ND1
|
K:HIS36
|
4.3
|
84.0
|
1.0
|
C3C
|
K:BCB101
|
4.4
|
80.6
|
1.0
|
C2D
|
K:BCB101
|
4.4
|
87.5
|
1.0
|
C2B
|
K:BCB101
|
4.4
|
79.9
|
1.0
|
C2C
|
K:BCB101
|
4.6
|
80.7
|
1.0
|
CG
|
K:HIS36
|
4.7
|
80.1
|
1.0
|
C2B
|
Q:BCB101
|
4.7
|
80.6
|
1.0
|
CBD
|
K:BCB101
|
4.9
|
89.9
|
1.0
|
|
Magnesium binding site 9 out
of 38 in 6et5
Go back to
Magnesium Binding Sites List in 6et5
Magnesium binding site 9 out
of 38 in the Reaction Centre Light Harvesting Complex 1 From Blc. Virids
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Reaction Centre Light Harvesting Complex 1 From Blc. Virids within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Mg101
b:83.7
occ:1.00
|
MG
|
P:BCB101
|
0.0
|
83.7
|
1.0
|
ND
|
P:BCB101
|
2.0
|
79.5
|
1.0
|
NA
|
P:BCB101
|
2.0
|
84.6
|
1.0
|
NC
|
P:BCB101
|
2.1
|
85.2
|
1.0
|
NB
|
P:BCB101
|
2.1
|
83.2
|
1.0
|
NE2
|
P:HIS36
|
2.6
|
83.1
|
1.0
|
C4D
|
P:BCB101
|
3.0
|
86.4
|
1.0
|
C1A
|
P:BCB101
|
3.0
|
85.4
|
1.0
|
C4A
|
P:BCB101
|
3.1
|
89.1
|
1.0
|
C4B
|
P:BCB101
|
3.1
|
79.6
|
1.0
|
C4C
|
P:BCB101
|
3.1
|
88.9
|
1.0
|
C1C
|
P:BCB101
|
3.1
|
83.3
|
1.0
|
C1B
|
P:BCB101
|
3.1
|
91.0
|
1.0
|
C1D
|
P:BCB101
|
3.1
|
83.1
|
1.0
|
CE1
|
P:HIS36
|
3.2
|
87.9
|
1.0
|
CHC
|
P:BCB101
|
3.5
|
75.0
|
1.0
|
CHA
|
P:BCB101
|
3.5
|
87.6
|
1.0
|
CHB
|
P:BCB101
|
3.5
|
87.8
|
1.0
|
CHD
|
P:BCB101
|
3.6
|
75.9
|
1.0
|
CD2
|
P:HIS36
|
3.8
|
83.7
|
1.0
|
CD1
|
R:ILE23
|
4.0
|
0.3
|
1.0
|
C3D
|
P:BCB101
|
4.1
|
93.0
|
1.0
|
CBB
|
T:BCB101
|
4.1
|
94.7
|
1.0
|
CMD
|
Q:BCB101
|
4.1
|
95.2
|
1.0
|
CMB
|
T:BCB101
|
4.2
|
90.4
|
1.0
|
C3B
|
P:BCB101
|
4.3
|
86.0
|
1.0
|
C3C
|
P:BCB101
|
4.3
|
85.0
|
1.0
|
C2D
|
P:BCB101
|
4.3
|
85.8
|
1.0
|
C3A
|
P:BCB101
|
4.4
|
88.6
|
1.0
|
C2B
|
P:BCB101
|
4.4
|
81.5
|
1.0
|
C2A
|
P:BCB101
|
4.4
|
85.8
|
1.0
|
ND1
|
P:HIS36
|
4.5
|
82.4
|
1.0
|
C2C
|
P:BCB101
|
4.5
|
81.7
|
1.0
|
CG
|
P:HIS36
|
4.8
|
82.5
|
1.0
|
CG2
|
R:ILE23
|
4.9
|
92.0
|
1.0
|
C2B
|
T:BCB101
|
4.9
|
91.3
|
1.0
|
CBD
|
P:BCB101
|
5.0
|
97.0
|
1.0
|
|
Magnesium binding site 10 out
of 38 in 6et5
Go back to
Magnesium Binding Sites List in 6et5
Magnesium binding site 10 out
of 38 in the Reaction Centre Light Harvesting Complex 1 From Blc. Virids
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Reaction Centre Light Harvesting Complex 1 From Blc. Virids within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
S:Mg101
b:77.2
occ:1.00
|
MG
|
S:BCB101
|
0.0
|
77.2
|
1.0
|
ND
|
S:BCB101
|
2.0
|
75.4
|
1.0
|
NA
|
S:BCB101
|
2.0
|
85.4
|
1.0
|
NB
|
S:BCB101
|
2.1
|
79.2
|
1.0
|
NC
|
S:BCB101
|
2.1
|
85.0
|
1.0
|
NE2
|
S:HIS36
|
2.5
|
79.3
|
1.0
|
C4D
|
S:BCB101
|
3.0
|
84.2
|
1.0
|
C1A
|
S:BCB101
|
3.0
|
88.1
|
1.0
|
C4A
|
S:BCB101
|
3.1
|
88.1
|
1.0
|
C4B
|
S:BCB101
|
3.1
|
71.7
|
1.0
|
C4C
|
S:BCB101
|
3.1
|
84.9
|
1.0
|
C1B
|
S:BCB101
|
3.1
|
80.8
|
1.0
|
C1D
|
S:BCB101
|
3.1
|
78.1
|
1.0
|
C1C
|
S:BCB101
|
3.1
|
78.5
|
1.0
|
CE1
|
S:HIS36
|
3.2
|
84.8
|
1.0
|
CHB
|
S:BCB101
|
3.5
|
86.8
|
1.0
|
CHA
|
S:BCB101
|
3.5
|
82.8
|
1.0
|
CHC
|
S:BCB101
|
3.5
|
68.3
|
1.0
|
CHD
|
S:BCB101
|
3.6
|
76.4
|
1.0
|
CD2
|
S:HIS36
|
3.7
|
84.7
|
1.0
|
CD1
|
U:ILE23
|
3.9
|
96.8
|
1.0
|
CBB
|
W:BCB101
|
4.0
|
89.6
|
1.0
|
CMB
|
W:BCB101
|
4.1
|
95.4
|
1.0
|
C3D
|
S:BCB101
|
4.1
|
84.6
|
1.0
|
CMD
|
T:BCB101
|
4.1
|
0.2
|
1.0
|
C2D
|
S:BCB101
|
4.3
|
83.8
|
1.0
|
C3C
|
S:BCB101
|
4.3
|
81.8
|
1.0
|
C3B
|
S:BCB101
|
4.3
|
83.5
|
1.0
|
C2B
|
S:BCB101
|
4.4
|
76.3
|
1.0
|
C3A
|
S:BCB101
|
4.4
|
86.2
|
1.0
|
C2A
|
S:BCB101
|
4.4
|
85.3
|
1.0
|
ND1
|
S:HIS36
|
4.4
|
78.7
|
1.0
|
C2C
|
S:BCB101
|
4.5
|
78.9
|
1.0
|
CG
|
S:HIS36
|
4.7
|
88.9
|
1.0
|
C2B
|
W:BCB101
|
4.8
|
85.6
|
1.0
|
CBD
|
S:BCB101
|
4.9
|
85.8
|
1.0
|
CG2
|
U:ILE23
|
4.9
|
95.4
|
1.0
|
CAB
|
W:BCB101
|
4.9
|
91.6
|
1.0
|
C2D
|
T:BCB101
|
5.0
|
88.2
|
1.0
|
|
Reference:
P.Qian,
C.A.Siebert,
P.Wang,
D.P.Canniffe,
C.N.Hunter.
Cryo-Em Structure of the Blastochloris Viridis LH1-Rc Complex at 2.9 Angstrom. Nature V. 556 203 2018.
ISSN: ESSN 1476-4687
PubMed: 29618818
DOI: 10.1038/S41586-018-0014-5
Page generated: Tue Oct 1 00:01:26 2024
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