Magnesium in PDB 6eu2: Apo Rna Polymerase III - Open Conformation (OPOL3)

Enzymatic activity of Apo Rna Polymerase III - Open Conformation (OPOL3)

All present enzymatic activity of Apo Rna Polymerase III - Open Conformation (OPOL3):
2.7.7.6;

Other elements in 6eu2:

The structure of Apo Rna Polymerase III - Open Conformation (OPOL3) also contains other interesting chemical elements:

Zinc (Zn) 6 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Apo Rna Polymerase III - Open Conformation (OPOL3) (pdb code 6eu2). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Apo Rna Polymerase III - Open Conformation (OPOL3), PDB code: 6eu2:

Magnesium binding site 1 out of 1 in 6eu2

Go back to Magnesium Binding Sites List in 6eu2
Magnesium binding site 1 out of 1 in the Apo Rna Polymerase III - Open Conformation (OPOL3)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Apo Rna Polymerase III - Open Conformation (OPOL3) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg2002

b:37.0
occ:1.00
OD1 A:ASP511 2.3 42.3 1.0
OD1 A:ASP513 2.5 32.9 1.0
OD2 A:ASP515 2.6 38.8 1.0
CG A:ASP511 2.8 42.3 1.0
OD2 A:ASP511 2.9 42.3 1.0
OD2 A:ASP513 3.1 32.9 1.0
CG A:ASP513 3.2 32.9 1.0
CG A:ASP515 3.4 38.8 1.0
OD1 A:ASP515 3.5 38.8 1.0
O A:ASP511 3.8 42.3 1.0
CB A:ASP511 4.2 42.3 1.0
C A:ASP511 4.4 42.3 1.0
O A:PHE512 4.5 38.0 1.0
CB A:ASP513 4.7 32.9 1.0
CA A:ASP511 4.7 42.3 1.0
C A:PHE512 4.9 38.0 1.0
CB A:ASP515 4.9 38.8 1.0
N A:ASP511 4.9 42.3 1.0

Reference:

G.Abascal-Palacios, E.P.Ramsay, F.Beuron, E.Morris, A.Vannini. Structural Basis of Rna Polymerase III Transcription Initiation. Nature V. 553 301 2018.
ISSN: ESSN 1476-4687
PubMed: 29345637
DOI: 10.1038/NATURE25441
Page generated: Mon Dec 14 22:39:35 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy