Magnesium in PDB 6f7t: Crystal Structure of An Fab Fragment in Complex with A Peptide From Bacillus Subtilis Rnase Y

The structure of Crystal Structure of An Fab Fragment in Complex with A Peptide From Bacillus Subtilis Rnase Y, PDB code: 6f7t was solved by B.Golinelli-Pimpaneau, P.Hardouin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.15 / 2.60
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	98.680, 130.450, 72.050, 90.00, 90.00, 90.00
R / Rfree (%)	20.2 / 25.3

The binding sites of Magnesium atom in the Crystal Structure of An Fab Fragment in Complex with A Peptide From Bacillus Subtilis Rnase Y (pdb code 6f7t). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of An Fab Fragment in Complex with A Peptide From Bacillus Subtilis Rnase Y, PDB code: 6f7t:

Magnesium binding site 1 out of 1 in the Crystal Structure of An Fab Fragment in Complex with A Peptide From Bacillus Subtilis Rnase Y


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of An Fab Fragment in Complex with A Peptide From Bacillus Subtilis Rnase Y within 5.0Å range: probe atom residue distance (Å) B Occ L:Mg301 b:90.0 occ:0.50 C L:GLY16 4.3 52.8 1.0 N L:ALA17 4.3 48.4 1.0 O L:GLY16 4.3 52.4 1.0 O L:LEU15 4.4 57.8 1.0 CA L:ALA17 4.5 49.3 1.0 ND2 A:ASN77 4.7 73.2 1.0 CB L:ALA17 4.7 50.2 1.0 CA L:GLY16 4.9 48.7 1.0

P.Hardouin, C.Velours, C.Bou-Nader, N.Assrir, S.Laalami, H.Putzer, D.Durand, B.Golinelli-Pimpaneau. Dissociation of the Dimer of the Intrinsically Disordered Domain of Rnase Y Upon Antibody Binding. Biophys. J. V. 115 2102 2018.
ISSN: ESSN 1542-0086
PubMed: 30447990
DOI: 10.1016/J.BPJ.2018.10.016