Magnesium in PDB 6f7u: Molecular Mechanism of Atp Versus Gtp Selectivity of Adenylate Kinase

All present enzymatic activity of Molecular Mechanism of Atp Versus Gtp Selectivity of Adenylate Kinase:
2.7.4.3;

The structure of Molecular Mechanism of Atp Versus Gtp Selectivity of Adenylate Kinase, PDB code: 6f7u was solved by P.Rogne, M.Rosselin, C.Grundstrom, C.Hedberg, M.Wolf-Watz, U.H.Sauer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.10 / 1.40
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	132.880, 31.779, 54.205, 90.00, 112.35, 90.00
R / Rfree (%)	17.5 / 19

The binding sites of Magnesium atom in the Molecular Mechanism of Atp Versus Gtp Selectivity of Adenylate Kinase (pdb code 6f7u). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Molecular Mechanism of Atp Versus Gtp Selectivity of Adenylate Kinase, PDB code: 6f7u:

Magnesium binding site 1 out of 1 in the Molecular Mechanism of Atp Versus Gtp Selectivity of Adenylate Kinase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Molecular Mechanism of Atp Versus Gtp Selectivity of Adenylate Kinase within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg302 b:39.8 occ:1.00 O3G A:GCP301 2.1 27.6 0.7 HOG3 A:GCP301 2.2 33.1 0.7 OD1 A:ASP84 2.6 23.6 1.0 HZ2 A:LYS13 3.1 26.9 1.0 HA3 A:GLY14 3.3 17.1 1.0 PG A:GCP301 3.3 19.0 0.7 HZ3 A:LYS13 3.4 26.9 1.0 HOG2 A:GCP301 3.4 22.4 0.7 HE22 A:GLN28 3.5 24.2 1.0 CG A:ASP84 3.5 17.9 1.0 O A:HOH537 3.6 25.1 1.0 O A:HOH640 3.6 39.7 1.0 OD2 A:ASP84 3.6 17.9 1.0 HE21 A:GLN28 3.6 24.2 1.0 HA2 A:GLY14 3.6 17.1 1.0 O2G A:GCP301 3.7 18.7 0.7 NZ A:LYS13 3.7 22.4 1.0 O1G A:GCP301 3.7 17.3 0.7 CA A:GLY14 3.8 14.2 1.0 H A:GLY14 3.8 17.0 1.0 HG3 A:LYS13 3.9 17.7 1.0 NE2 A:GLN28 3.9 20.1 1.0 O A:HOH580 4.0 31.1 1.0 HZ1 A:LYS13 4.0 26.9 1.0 N A:GLY14 4.1 14.2 1.0 HG2 A:LYS13 4.3 17.7 1.0 CG A:LYS13 4.5 14.7 1.0 C3B A:GCP301 4.7 18.9 0.7 H3B2 A:GCP301 4.8 22.7 0.7 CB A:ASP84 4.8 15.4 1.0 H3B1 A:GCP301 4.9 22.7 0.7 CE A:LYS13 4.9 18.6 1.0

P.Rogne, M.Rosselin, C.Grundstrom, C.Hedberg, U.H.Sauer, M.Wolf-Watz. Molecular Mechanism of Atp Versus Gtp Selectivity of Adenylate Kinase. Proc. Natl. Acad. Sci. V. 115 3012 2018U.S.A..
ISSN: ESSN 1091-6490
PubMed: 29507216
DOI: 10.1073/PNAS.1721508115