Magnesium in PDB 6fcy: Catalytic Subunit Hisg From Psychrobacter Arcticus Atp Phosphoribosyltransferase (Hiszg Atpprt) in Complex with Prpp and Adp

Enzymatic activity of Catalytic Subunit Hisg From Psychrobacter Arcticus Atp Phosphoribosyltransferase (Hiszg Atpprt) in Complex with Prpp and Adp

All present enzymatic activity of Catalytic Subunit Hisg From Psychrobacter Arcticus Atp Phosphoribosyltransferase (Hiszg Atpprt) in Complex with Prpp and Adp:
2.4.2.17;

Protein crystallography data

The structure of Catalytic Subunit Hisg From Psychrobacter Arcticus Atp Phosphoribosyltransferase (Hiszg Atpprt) in Complex with Prpp and Adp, PDB code: 6fcy was solved by M.S.Alphey, Y.Ge, G.Fisher, C.M.Czekster, J.H.Naismith, R.G.Da Silva, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.03 / 1.96
Space group I 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 70.580, 34.040, 93.868, 90.00, 91.61, 90.00
R / Rfree (%) 18.5 / 22.3

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Catalytic Subunit Hisg From Psychrobacter Arcticus Atp Phosphoribosyltransferase (Hiszg Atpprt) in Complex with Prpp and Adp (pdb code 6fcy). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Catalytic Subunit Hisg From Psychrobacter Arcticus Atp Phosphoribosyltransferase (Hiszg Atpprt) in Complex with Prpp and Adp, PDB code: 6fcy:

Magnesium binding site 1 out of 1 in 6fcy

Go back to Magnesium Binding Sites List in 6fcy
Magnesium binding site 1 out of 1 in the Catalytic Subunit Hisg From Psychrobacter Arcticus Atp Phosphoribosyltransferase (Hiszg Atpprt) in Complex with Prpp and Adp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Catalytic Subunit Hisg From Psychrobacter Arcticus Atp Phosphoribosyltransferase (Hiszg Atpprt) in Complex with Prpp and Adp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg303

b:54.7
occ:1.00
 O1A A:PRP301 2.1 64.4 1.0
O2A A:ADP302 2.4 76.5 1.0
O2B A:ADP302 2.4 81.7 1.0
O3B A:PRP301 2.7 77.9 1.0
O1B A:PRP301 3.0 80.0 1.0
PB A:PRP301 3.2 79.0 1.0
PA A:PRP301 3.2 65.6 1.0
PA A:ADP302 3.3 71.3 1.0
O3A A:ADP302 3.4 78.5 1.0
O3A A:PRP301 3.4 70.5 1.0
PB A:ADP302 3.5 80.4 1.0
O1A A:ADP302 4.0 73.9 1.0
O1 A:PRP301 4.0 58.4 1.0
NH2 A:ARG32 4.1 49.1 1.0
O3B A:ADP302 4.2 78.2 1.0
C1 A:PRP301 4.5 47.9 1.0
O2 A:PRP301 4.5 42.1 1.0
O2A A:PRP301 4.5 61.5 1.0
O5' A:ADP302 4.7 67.7 1.0
O1B A:ADP302 4.7 77.7 1.0
O2B A:PRP301 4.7 80.1 1.0
O A:HOH463 4.9 36.1 1.0

Reference:

M.S.Alphey, G.Fisher, J.S.Hirschi, R.Stroek, Y.Ge, E.R.Gould, C.M.Czekster, H.Liu, G.J.Florence, M.J.Vetticatt, J.H.Naismith, R.G.Da Silva. Catalytic and Anticatalytic Snapshots of A Short-Form Atp Phosphoribosyltransferase Acs Catalysis 2018.
ISSN: ESSN 2155-5435
DOI: 10.1021/ACSCATAL.8B00867
Page generated: Mon Dec 14 22:41:11 2020

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