Magnesium in PDB 6fhk: Structure of A Modified Protein Containing A Genetically Encoded Phosphoserine

The structure of Structure of A Modified Protein Containing A Genetically Encoded Phosphoserine, PDB code: 6fhk was solved by M.Mukherjee, R.Bayliss, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	55.09 / 1.66
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	51.625, 110.876, 63.483, 90.00, 90.41, 90.00
R / Rfree (%)	16.2 / 19.4

The structure of Structure of A Modified Protein Containing A Genetically Encoded Phosphoserine also contains other interesting chemical elements:

Potassium

(K)

2 atoms

The binding sites of Magnesium atom in the Structure of A Modified Protein Containing A Genetically Encoded Phosphoserine (pdb code 6fhk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of A Modified Protein Containing A Genetically Encoded Phosphoserine, PDB code: 6fhk:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of A Modified Protein Containing A Genetically Encoded Phosphoserine


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of A Modified Protein Containing A Genetically Encoded Phosphoserine within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg403 b:15.2 occ:1.00 O3 A:PO4402 2.0 14.6 1.0 O1B A:ADP401 2.0 14.9 1.0 O A:HOH556 2.0 16.6 1.0 O A:HOH602 2.1 16.2 1.0 O A:HOH519 2.1 21.3 1.0 O A:HOH585 2.2 25.0 1.0 PB A:ADP401 3.3 13.5 1.0 P A:PO4402 3.3 16.0 1.0 O2 A:PO4402 3.5 16.9 1.0 K A:K404 3.5 23.8 1.0 O2B A:ADP401 3.6 19.1 1.0 O1A A:ADP401 4.0 15.2 1.0 O A:HOH636 4.1 25.7 1.0 O1 A:PO4402 4.1 19.1 1.0 OD2 A:ASP199 4.1 34.9 1.0 OD2 A:ASP10 4.2 19.6 1.0 OE1 A:GLU175 4.2 20.2 1.0 OD1 A:ASP199 4.3 26.6 1.0 O3A A:ADP401 4.3 15.9 1.0 O4 A:PO4402 4.3 18.5 1.0 OD1 A:ASP10 4.3 19.7 1.0 O3B A:ADP401 4.4 13.1 1.0 CG A:ASP199 4.7 29.7 1.0 O A:HOH535 4.7 17.8 1.0 CG A:ASP10 4.7 20.9 1.0 PA A:ADP401 4.8 14.2 1.0 CD A:GLU175 4.8 26.1 1.0 O A:HOH656 4.9 21.9 1.0 CA A:GLY12 4.9 13.1 1.0

Magnesium binding site 2 out of 2 in the Structure of A Modified Protein Containing A Genetically Encoded Phosphoserine


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of A Modified Protein Containing A Genetically Encoded Phosphoserine within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg403 b:13.7 occ:1.00 O2 B:PO4402 2.0 15.7 1.0 O3B B:ADP401 2.0 15.8 1.0 O B:HOH540 2.0 19.9 1.0 O B:HOH566 2.1 17.8 1.0 O B:HOH520 2.1 19.9 1.0 O B:HOH548 2.1 26.5 1.0 PB B:ADP401 3.2 14.6 1.0 P B:PO4402 3.3 15.1 1.0 O3 B:PO4402 3.5 17.4 1.0 K B:K404 3.6 23.6 1.0 O2B B:ADP401 3.6 17.6 1.0 O2A B:ADP401 4.0 16.5 1.0 O B:HOH667 4.1 26.2 1.0 OD2 B:ASP199 4.1 39.0 1.0 O4 B:PO4402 4.1 15.8 1.0 OD1 B:ASP199 4.2 31.2 1.0 O3A B:ADP401 4.2 14.4 1.0 O1B B:ADP401 4.3 14.0 1.0 OD2 B:ASP10 4.3 18.9 1.0 OE1 B:GLU175 4.3 21.8 1.0 O1 B:PO4402 4.4 18.1 1.0 OD1 B:ASP10 4.4 19.8 1.0 CG B:ASP199 4.6 32.6 1.0 O B:HOH536 4.7 18.5 1.0 PA B:ADP401 4.8 15.1 1.0 CG B:ASP10 4.8 20.2 1.0 CD B:GLU175 4.8 24.8 1.0 O B:HOH623 4.9 18.6 1.0 CA B:GLY12 5.0 13.1 1.0

M.Mukherjee, S.Sabir, L.O'regan, J.Sampson, M.W.Richards, N.Huguenin-Dezot, J.R.Ault, J.W.Chin, A.Zhuravleva, A.M.Fry, R.Bayliss. Mitotic Phosphorylation Regulates HSP72 Spindle Localization By Uncoupling Atp Binding From Substrate Release. Sci Signal V. 11 2018.
ISSN: ESSN 1937-9145
PubMed: 30108182
DOI: 10.1126/SCISIGNAL.AAO2464