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Magnesium in PDB 6fw3: Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-007
Enzymatic activity of Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-007
All present enzymatic activity of Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-007:
3.1.4.53;
3.1.4.53;
Protein crystallography data
The structure of Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-007, PDB code: 6fw3
was solved by
A.K.Singh,
D.G.Brown,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 65.23 / 1.78 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 99.110, 110.717, 161.490, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 17.7 / 21.4 |
Other elements in 6fw3:
The structure of Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-007 also contains other interesting chemical elements:
| Zinc | (Zn) | 4 atoms |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-007
(pdb code 6fw3). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-007, PDB code: 6fw3:
Jump to Magnesium binding site number: 1; 2; 3; 4;
In total 4 binding sites of Magnesium where determined in the Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-007, PDB code: 6fw3:
Jump to Magnesium binding site number: 1; 2; 3; 4;
Magnesium binding site 1 out of 4 in 6fw3
Go back to
Magnesium Binding Sites List in 6fw3
Magnesium binding site 1 out
of 4 in the Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-007
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-007 within 5.0Å range:
|
Magnesium binding site 2 out of 4 in 6fw3
Go back to
Magnesium Binding Sites List in 6fw3
Magnesium binding site 2 out
of 4 in the Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-007
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-007 within 5.0Å range:
|
Magnesium binding site 3 out of 4 in 6fw3
Go back to
Magnesium Binding Sites List in 6fw3
Magnesium binding site 3 out
of 4 in the Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-007
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-007 within 5.0Å range:
|
Magnesium binding site 4 out of 4 in 6fw3
Go back to
Magnesium Binding Sites List in 6fw3
Magnesium binding site 4 out
of 4 in the Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-007
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Crystal Structure of Human Phosphodiesterase 4D2 Catalytic Domain with Inhibitor Npd-007 within 5.0Å range:
|
Reference:
I.G.Salado,
C.Moreno,
G.Sakaine,
A.K.Singh,
A.R.Blaazer,
M.Siderius,
A.Matheeussen,
S.Gul,
L.Maes,
R.Leurs,
D.G.Brown,
K.Augustyns.
HPDE4D2 Structure with Inhibitor Npd-007 To Be Published.
Page generated: Tue Oct 1 00:53:02 2024
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