Magnesium in PDB 6fwh: Acanthamoeba Igpd in Complex with R-C348 to 1.7A Resolution

Enzymatic activity of Acanthamoeba Igpd in Complex with R-C348 to 1.7A Resolution

All present enzymatic activity of Acanthamoeba Igpd in Complex with R-C348 to 1.7A Resolution:
4.2.1.19;

Protein crystallography data

The structure of Acanthamoeba Igpd in Complex with R-C348 to 1.7A Resolution, PDB code: 6fwh was solved by C.W.Roberts, C.Bisson, P.J.Baker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 95.44 / 1.79
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 167.690, 156.100, 117.120, 90.00, 125.42, 90.00
R / Rfree (%) 14.9 / 19

Other elements in 6fwh:

The structure of Acanthamoeba Igpd in Complex with R-C348 to 1.7A Resolution also contains other interesting chemical elements:

Manganese (Mn) 24 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Acanthamoeba Igpd in Complex with R-C348 to 1.7A Resolution (pdb code 6fwh). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Acanthamoeba Igpd in Complex with R-C348 to 1.7A Resolution, PDB code: 6fwh:

Magnesium binding site 1 out of 1 in 6fwh

Go back to Magnesium Binding Sites List in 6fwh
Magnesium binding site 1 out of 1 in the Acanthamoeba Igpd in Complex with R-C348 to 1.7A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Acanthamoeba Igpd in Complex with R-C348 to 1.7A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg205

b:17.6
occ:1.00
OE1 L:GLN82 2.3 27.7 1.0
O L:GLN7 2.4 20.2 1.0
O L:HOH408 2.4 33.6 1.0
O L:HOH410 2.4 33.5 1.0
O L:HOH398 2.5 25.1 1.0
CD L:GLN82 3.4 44.6 1.0
C L:GLN7 3.6 22.5 1.0
NE2 L:GLN82 4.0 26.0 1.0
CG2 L:VAL8 4.0 16.1 1.0
N L:GLN7 4.2 12.6 1.0
N L:VAL8 4.5 19.0 1.0
CA L:GLN7 4.5 21.7 1.0
CA L:VAL8 4.5 16.3 1.0
CG L:GLN82 4.7 27.3 1.0
O L:HOH394 4.7 30.0 1.0
CB L:VAL8 4.9 15.8 1.0
CB L:GLN82 5.0 19.7 1.0

Reference:

C.A.Rice, S.J.Campbell, C.Bisson, H.J.Owen, S.E.Sedelnikova, P.J.Baker, D.W.Rice, F.L.Henriquez, C.W.Roberts. Structural and Functional Studies of Histidine Biosynthesis in Acanthamoeba Spp. Demonstrates A Novel Molecular Arrangement and Target For Antimicrobials. Plos One V. 13 98827 2018.
ISSN: ESSN 1932-6203
PubMed: 29969448
DOI: 10.1371/JOURNAL.PONE.0198827
Page generated: Mon Dec 14 22:43:14 2020

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