Magnesium in PDB 6gic: Crystal Structure of Glutathione Transferase Omega 2S From Trametes Versicolor in Complex with Oxyresveratrol

Protein crystallography data

The structure of Crystal Structure of Glutathione Transferase Omega 2S From Trametes Versicolor in Complex with Oxyresveratrol, PDB code: 6gic was solved by M.Schwartz, F.Favier, C.Didierjean, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.90 / 2.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 58.612, 93.903, 95.800, 90.00, 90.00, 90.00
R / Rfree (%) 19.3 / 25.2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Glutathione Transferase Omega 2S From Trametes Versicolor in Complex with Oxyresveratrol (pdb code 6gic). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Glutathione Transferase Omega 2S From Trametes Versicolor in Complex with Oxyresveratrol, PDB code: 6gic:

Magnesium binding site 1 out of 1 in 6gic

Go back to Magnesium Binding Sites List in 6gic
Magnesium binding site 1 out of 1 in the Crystal Structure of Glutathione Transferase Omega 2S From Trametes Versicolor in Complex with Oxyresveratrol


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Glutathione Transferase Omega 2S From Trametes Versicolor in Complex with Oxyresveratrol within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg301

b:31.8
occ:1.00
OD2 B:ASP125 2.1 23.3 1.0
OE1 B:GLU131 2.3 37.9 1.0
HE22 B:GLN122 3.1 32.1 1.0
CG B:ASP125 3.1 28.0 1.0
HB3 B:ASP125 3.4 32.3 1.0
CD B:GLU131 3.5 30.0 1.0
O B:HOH408 3.7 27.8 1.0
CB B:ASP125 3.7 26.9 1.0
OE1 B:GLN122 3.8 30.8 1.0
NE2 B:GLN122 3.9 26.8 1.0
HB2 B:ASP125 3.9 32.3 1.0
OE2 B:GLU131 4.1 26.2 1.0
OD1 B:ASP125 4.2 28.8 1.0
CD B:GLN122 4.3 35.5 1.0
O B:HOH418 4.3 25.0 1.0
HB3 B:GLU131 4.5 31.4 1.0
HE21 B:GLN122 4.6 32.1 1.0
HB2 B:GLU131 4.6 31.4 1.0
CG B:GLU131 4.7 26.9 1.0
CB B:GLU131 4.8 26.1 1.0
HG2 B:PRO135 4.9 40.0 1.0

Reference:

T.Perrot, M.Schwartz, F.Saiag, G.Salzet, S.Dumarcay, F.Favier, P.Gerardin, J.-M.Girardet, R.Sormani, M.Morel-Rouhier, N.Amusant, C.Didierjean, E.Gelhaye. Fungal Glutathione Transferases As Tools to Explore the Chemical Diversity of Amazonian Wood Extractives Acs Sust Chem Eng 2018.
DOI: 10.1021/ACSSUSCHEMENG.8B02636
Page generated: Mon Dec 14 22:45:04 2020

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