Magnesium in PDB 6gmh: Structure of Activated Transcription Complex Pol II-Dsif-Paf-SPT6

All present enzymatic activity of Structure of Activated Transcription Complex Pol II-Dsif-Paf-SPT6:
2.7.7.6;

The structure of Structure of Activated Transcription Complex Pol II-Dsif-Paf-SPT6 also contains other interesting chemical elements:

Zinc

(Zn)

9 atoms

The binding sites of Magnesium atom in the Structure of Activated Transcription Complex Pol II-Dsif-Paf-SPT6 (pdb code 6gmh). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Activated Transcription Complex Pol II-Dsif-Paf-SPT6, PDB code: 6gmh:

Magnesium binding site 1 out of 1 in the Structure of Activated Transcription Complex Pol II-Dsif-Paf-SPT6


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Activated Transcription Complex Pol II-Dsif-Paf-SPT6 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2003 b:70.5 occ:1.00 O3' P:U46 2.1 81.2 1.0 OD1 A:ASP497 2.1 79.4 1.0 OD2 A:ASP497 2.4 79.4 1.0 CB A:ASP495 2.5 81.4 1.0 CG A:ASP497 2.5 79.4 1.0 OD2 A:ASP495 2.8 81.4 1.0 OD1 A:ASP499 3.1 79.7 1.0 CG A:ASP495 3.1 81.4 1.0 C3' P:U46 3.4 81.2 1.0 OD2 A:ASP499 3.5 79.7 1.0 CG A:ASP499 3.6 79.7 1.0 O2' P:U46 3.7 81.2 1.0 CA A:ASP495 3.9 81.4 1.0 C4' P:U46 3.9 81.2 1.0 CB A:ASP497 4.0 79.4 1.0 C2' P:U46 4.1 81.2 1.0 N A:ASP495 4.3 81.4 1.0 OD1 A:ASP495 4.3 81.4 1.0 C A:ASP495 4.4 81.4 1.0 C5' P:U46 4.5 81.2 1.0 N A:ASP497 4.5 79.4 1.0 CA A:ASP497 4.8 79.4 1.0 O A:ASP495 4.9 81.4 1.0 N A:PHE496 4.9 74.4 1.0

S.M.Vos, L.Farnung, M.Boehning, C.Wigge, A.Linden, H.Urlaub, P.Cramer. Structure of Activated Transcription Complex Pol II-Dsif-Paf-SPT6. Nature V. 560 607 2018.
ISSN: ISSN 0028-0836
PubMed: 30135578
DOI: 10.1038/S41586-018-0440-4