Atomistry » Magnesium » PDB 6gg6-6gof » 6gmh
Atomistry »
  Magnesium »
    PDB 6gg6-6gof »
      6gmh »

Magnesium in PDB 6gmh: Structure of Activated Transcription Complex Pol II-Dsif-Paf-SPT6

Enzymatic activity of Structure of Activated Transcription Complex Pol II-Dsif-Paf-SPT6

All present enzymatic activity of Structure of Activated Transcription Complex Pol II-Dsif-Paf-SPT6:
2.7.7.6;

Other elements in 6gmh:

The structure of Structure of Activated Transcription Complex Pol II-Dsif-Paf-SPT6 also contains other interesting chemical elements:

Zinc (Zn) 9 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of Activated Transcription Complex Pol II-Dsif-Paf-SPT6 (pdb code 6gmh). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Activated Transcription Complex Pol II-Dsif-Paf-SPT6, PDB code: 6gmh:

Magnesium binding site 1 out of 1 in 6gmh

Go back to Magnesium Binding Sites List in 6gmh
Magnesium binding site 1 out of 1 in the Structure of Activated Transcription Complex Pol II-Dsif-Paf-SPT6


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Activated Transcription Complex Pol II-Dsif-Paf-SPT6 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg2003

b:70.5
occ:1.00
O3' P:U46 2.1 81.2 1.0
OD1 A:ASP497 2.1 79.4 1.0
OD2 A:ASP497 2.4 79.4 1.0
CB A:ASP495 2.5 81.4 1.0
CG A:ASP497 2.5 79.4 1.0
OD2 A:ASP495 2.8 81.4 1.0
OD1 A:ASP499 3.1 79.7 1.0
CG A:ASP495 3.1 81.4 1.0
C3' P:U46 3.4 81.2 1.0
OD2 A:ASP499 3.5 79.7 1.0
CG A:ASP499 3.6 79.7 1.0
O2' P:U46 3.7 81.2 1.0
CA A:ASP495 3.9 81.4 1.0
C4' P:U46 3.9 81.2 1.0
CB A:ASP497 4.0 79.4 1.0
C2' P:U46 4.1 81.2 1.0
N A:ASP495 4.3 81.4 1.0
OD1 A:ASP495 4.3 81.4 1.0
C A:ASP495 4.4 81.4 1.0
C5' P:U46 4.5 81.2 1.0
N A:ASP497 4.5 79.4 1.0
CA A:ASP497 4.8 79.4 1.0
O A:ASP495 4.9 81.4 1.0
N A:PHE496 4.9 74.4 1.0

Reference:

S.M.Vos, L.Farnung, M.Boehning, C.Wigge, A.Linden, H.Urlaub, P.Cramer. Structure of Activated Transcription Complex Pol II-Dsif-Paf-SPT6. Nature V. 560 607 2018.
ISSN: ISSN 0028-0836
PubMed: 30135578
DOI: 10.1038/S41586-018-0440-4
Page generated: Tue Oct 1 01:16:43 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy