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Magnesium in PDB 6gp7: Cell Division Regulator, B. Subtilis Gpsb, in Complex with Peptide Fragment of Penicillin Binding Protein PBP1A

Protein crystallography data

The structure of Cell Division Regulator, B. Subtilis Gpsb, in Complex with Peptide Fragment of Penicillin Binding Protein PBP1A, PDB code: 6gp7 was solved by R.M.Cleverley, R.J.Lewis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.57 / 1.95
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 31.472, 53.753, 85.912, 90.00, 90.00, 90.00
R / Rfree (%) 18.7 / 21.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cell Division Regulator, B. Subtilis Gpsb, in Complex with Peptide Fragment of Penicillin Binding Protein PBP1A (pdb code 6gp7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cell Division Regulator, B. Subtilis Gpsb, in Complex with Peptide Fragment of Penicillin Binding Protein PBP1A, PDB code: 6gp7:

Magnesium binding site 1 out of 1 in 6gp7

Go back to Magnesium Binding Sites List in 6gp7
Magnesium binding site 1 out of 1 in the Cell Division Regulator, B. Subtilis Gpsb, in Complex with Peptide Fragment of Penicillin Binding Protein PBP1A


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cell Division Regulator, B. Subtilis Gpsb, in Complex with Peptide Fragment of Penicillin Binding Protein PBP1A within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg101

b:23.7
occ:1.00
OD1 D:ASN15 2.1 51.4 1.0
CG D:ASN15 3.2 48.5 1.0
ND2 D:ASN15 4.1 46.5 1.0
CB D:ASN15 4.2 47.8 1.0
CA D:ASN15 4.2 51.8 1.0
N D:ASN15 4.5 45.8 1.0
O D:ALA14 4.7 45.8 1.0
C D:ALA14 4.8 43.5 1.0

Reference:

R.M.Cleverley, Z.J.Rutter, J.Rismondo, F.Corona, H.T.Tsui, F.A.Alatawi, R.A.Daniel, S.Halbedel, O.Massidda, M.E.Winkler, R.J.Lewis. The Cell Cycle Regulator Gpsb Functions As Cytosolic Adaptor For Multiple Cell Wall Enzymes. Nat Commun V. 10 261 2019.
ISSN: ESSN 2041-1723
PubMed: 30651563
DOI: 10.1038/S41467-018-08056-2
Page generated: Tue Oct 1 01:18:53 2024

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