Magnesium in PDB 6gs0: Native Glucuronoyl Esterase From Opitutus Terrae

The structure of Native Glucuronoyl Esterase From Opitutus Terrae, PDB code: 6gs0 was solved by L.Lo Leggio, J.Larsbrink, R.Meland Knudsen, S.Mazurkewich, J.C.Navarropoulsen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.43 / 1.34
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	43.361, 44.263, 50.027, 75.86, 66.33, 70.88
R / Rfree (%)	17.3 / 20.7

The binding sites of Magnesium atom in the Native Glucuronoyl Esterase From Opitutus Terrae (pdb code 6gs0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Native Glucuronoyl Esterase From Opitutus Terrae, PDB code: 6gs0:

Magnesium binding site 1 out of 1 in the Native Glucuronoyl Esterase From Opitutus Terrae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Native Glucuronoyl Esterase From Opitutus Terrae within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg512 b:16.9 occ:1.00 O A:GLU305 2.2 17.8 1.0 O A:HOH725 2.3 19.2 1.0 O A:HIS303 2.3 16.8 1.0 O A:HOH894 2.3 18.3 1.0 O A:HOH863 2.4 13.8 1.0 O A:HOH721 2.4 31.8 1.0 H A:HIS303 3.2 21.7 1.0 C A:GLU305 3.4 15.1 1.0 HB2 A:ASP360 3.5 15.1 1.0 C A:HIS303 3.5 15.6 1.0 HB2 A:CYS293 3.6 18.3 1.0 N A:HIS303 3.8 18.1 1.0 HA A:THR306 3.9 17.5 1.0 HB3 A:ASP360 3.9 15.1 1.0 N A:GLU305 4.0 16.0 1.0 H A:GLU305 4.0 19.2 1.0 HB3 A:GLU305 4.1 15.7 1.0 CB A:ASP360 4.1 12.6 1.0 HB3 A:HIS303 4.2 19.9 1.0 CA A:HIS303 4.2 18.2 1.0 C A:GLY304 4.2 13.9 1.0 HB2 A:ALA297 4.2 19.3 1.0 CA A:GLU305 4.2 15.2 1.0 O A:HOH658 4.3 19.6 1.0 HA A:CYS293 4.3 15.0 1.0 HA3 A:GLY304 4.4 19.4 1.0 CB A:CYS293 4.4 15.2 1.0 HB3 A:ALA297 4.4 19.3 1.0 HA A:SER299 4.4 19.1 1.0 N A:THR306 4.4 15.0 1.0 N A:GLY304 4.4 16.0 1.0 OD2 A:ASP360 4.5 15.9 1.0 O A:LEU298 4.5 17.4 1.0 O A:TRP358 4.6 16.9 1.0 CA A:GLY304 4.6 16.2 1.0 CA A:THR306 4.7 14.6 1.0 O A:GLY304 4.7 17.5 1.0 CB A:GLU305 4.7 13.1 1.0 HG21 A:THR306 4.7 22.4 1.0 SG A:CYS293 4.7 15.6 1.0 H A:ILE302 4.7 26.4 1.0 CB A:HIS303 4.8 16.6 1.0 C A:ILE302 4.8 21.4 1.0 CB A:ALA297 4.8 16.1 1.0 HA A:ILE302 4.8 28.6 1.0 CG A:ASP360 4.8 18.2 1.0 CA A:CYS293 4.8 12.5 1.0 HG A:CYS293 4.9 18.7 1.0 O A:HOH681 4.9 15.2 1.0

J.Arnling Baath, S.Mazurkewich, R.M.Knudsen, J.N.Poulsen, L.Olsson, L.Lo Leggio, J.Larsbrink. Biochemical and Structural Features of Diverse Bacterial Glucuronoyl Esterases Facilitating Recalcitrant Biomass Conversion. Biotechnol Biofuels V. 11 213 2018.
ISSN: ESSN 1754-6834
PubMed: 30083226
DOI: 10.1186/S13068-018-1213-X