Magnesium in PDB 6h73: Molybdenum Storage Protein - Recombinantly Produced and Loaded with Molybdate Under in Vitro Conditions

Protein crystallography data

The structure of Molybdenum Storage Protein - Recombinantly Produced and Loaded with Molybdate Under in Vitro Conditions, PDB code: 6h73 was solved by U.Ermler, S.Bruenle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.23 / 2.30
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 115.190, 115.190, 233.060, 90.00, 90.00, 120.00
R / Rfree (%) 21.1 / 23.3

Other elements in 6h73:

The structure of Molybdenum Storage Protein - Recombinantly Produced and Loaded with Molybdate Under in Vitro Conditions also contains other interesting chemical elements:

Molybdenum (Mo) 12 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Molybdenum Storage Protein - Recombinantly Produced and Loaded with Molybdate Under in Vitro Conditions (pdb code 6h73). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Molybdenum Storage Protein - Recombinantly Produced and Loaded with Molybdate Under in Vitro Conditions, PDB code: 6h73:

Magnesium binding site 1 out of 1 in 6h73

Go back to Magnesium Binding Sites List in 6h73
Magnesium binding site 1 out of 1 in the Molybdenum Storage Protein - Recombinantly Produced and Loaded with Molybdate Under in Vitro Conditions


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Molybdenum Storage Protein - Recombinantly Produced and Loaded with Molybdate Under in Vitro Conditions within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg303

b:43.8
occ:1.00
O1B A:ATP302 2.1 35.0 1.0
O A:PRO227 2.1 48.0 1.0
O2A A:ATP302 2.1 40.3 1.0
O A:HOH417 2.1 48.7 1.0
O A:HOH413 2.1 41.8 1.0
OE1 A:GLU190 2.4 57.3 1.0
CD A:GLU190 3.1 60.5 1.0
OE2 A:GLU190 3.3 63.7 1.0
C A:PRO227 3.3 44.8 1.0
PB A:ATP302 3.4 34.4 1.0
PA A:ATP302 3.4 41.7 1.0
O3A A:ATP302 3.8 40.8 1.0
OD2 A:ASP171 3.8 44.7 1.0
O3G A:ATP302 3.9 33.8 1.0
CA A:PRO227 4.1 46.8 1.0
O B:HOH414 4.2 48.6 1.0
NZ A:LYS45 4.2 34.2 1.0
N A:VAL228 4.2 42.0 1.0
O2B A:ATP302 4.3 43.2 1.0
CA A:VAL228 4.3 40.4 1.0
OD1 A:ASP171 4.4 44.8 1.0
C5' A:ATP302 4.4 44.0 1.0
O5' A:ATP302 4.4 45.2 1.0
O1A A:ATP302 4.4 50.3 1.0
O A:HOH408 4.5 38.4 1.0
CG A:GLU190 4.5 55.5 1.0
CB A:PRO227 4.5 40.5 1.0
O3B A:ATP302 4.5 36.6 1.0
CG A:ASP171 4.5 44.1 1.0
PG A:ATP302 4.8 35.9 1.0
CG1 A:VAL228 4.8 34.4 1.0
O A:HOH402 4.9 47.6 1.0

Reference:

S.Brunle, J.Poppe, R.Hail, U.Demmer, U.Ermler. The Molybdenum Storage Protein - A Bionanolab For Creating Experimentally Alterable Polyoxomolybdate Clusters. J. Inorg. Biochem. V. 189 172 2018.
ISSN: ISSN 1873-3344
PubMed: 30278367
DOI: 10.1016/J.JINORGBIO.2018.09.011
Page generated: Mon Dec 14 22:47:41 2020

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