Magnesium in PDB 6ht6: Crystal Structure of Glutathione Transferase Omega 2S From Trametes Versicolor in Complex with 2,4-Dihydroxybenzophenone

Protein crystallography data

The structure of Crystal Structure of Glutathione Transferase Omega 2S From Trametes Versicolor in Complex with 2,4-Dihydroxybenzophenone, PDB code: 6ht6 was solved by M.Schwartz, F.Favier, C.Didierjean, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.77 / 2.67
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 58.999, 93.128, 95.548, 90.00, 90.00, 90.00
R / Rfree (%) 22.1 / 28.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Glutathione Transferase Omega 2S From Trametes Versicolor in Complex with 2,4-Dihydroxybenzophenone (pdb code 6ht6). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Glutathione Transferase Omega 2S From Trametes Versicolor in Complex with 2,4-Dihydroxybenzophenone, PDB code: 6ht6:

Magnesium binding site 1 out of 1 in 6ht6

Go back to Magnesium Binding Sites List in 6ht6
Magnesium binding site 1 out of 1 in the Crystal Structure of Glutathione Transferase Omega 2S From Trametes Versicolor in Complex with 2,4-Dihydroxybenzophenone


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Glutathione Transferase Omega 2S From Trametes Versicolor in Complex with 2,4-Dihydroxybenzophenone within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg301

b:49.8
occ:1.00
OD2 B:ASP125 1.8 50.3 1.0
OE1 B:GLU131 2.5 49.5 1.0
HE22 B:GLN122 2.9 58.2 1.0
CG B:ASP125 3.0 40.5 1.0
HB3 B:ASP125 3.5 58.0 1.0
CD B:GLU131 3.7 37.2 1.0
NE2 B:GLN122 3.7 48.5 1.0
CB B:ASP125 3.7 48.3 1.0
OD1 B:ASP125 3.8 38.7 1.0
OE1 B:GLN122 3.9 30.2 1.0
HB2 B:ASP125 4.0 58.0 1.0
CD B:GLN122 4.3 41.8 1.0
OE2 B:GLU131 4.3 33.5 1.0
HE21 B:GLN122 4.4 58.2 1.0
HB3 B:GLU131 4.4 50.8 1.0
HB2 B:GLU131 4.7 50.8 1.0
CG B:GLU131 4.8 44.7 1.0
CB B:GLU131 4.9 42.4 1.0

Reference:

M.Schwartz, T.Perrot, E.Aubert, S.Dumarcay, F.Favier, P.Gerardin, M.Morel-Rouhier, G.Mulliert, F.Saiag, C.Didierjean, E.Gelhaye. Molecular Recognition of Wood Polyphenols By Phase II Detoxification Enzymes of the White Rot Trametes Versicolor. Sci Rep V. 8 8472 2018.
ISSN: ESSN 2045-2322
PubMed: 29855494
DOI: 10.1038/S41598-018-26601-3
Page generated: Mon Dec 14 22:51:00 2020

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