Magnesium in PDB 6hw1: Room Temperature Structure of Lipase From T. Lanuginosa at 2.5 A Resolution in Chipx Microfluidic Device

All present enzymatic activity of Room Temperature Structure of Lipase From T. Lanuginosa at 2.5 A Resolution in Chipx Microfluidic Device:
3.1.1.3;

The structure of Room Temperature Structure of Lipase From T. Lanuginosa at 2.5 A Resolution in Chipx Microfluidic Device, PDB code: 6hw1 was solved by J.A.Gavira, R.Fernadez-Penas, S.Martinez-Rodriguez, C.Verdugo-Escamilla, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.06 / 2.50
Space group	P 61
Cell size a, b, c (Å), α, β, γ (°)	142.652, 142.652, 80.721, 90.00, 90.00, 120.00
R / Rfree (%)	17.2 / 19.9

The binding sites of Magnesium atom in the Room Temperature Structure of Lipase From T. Lanuginosa at 2.5 A Resolution in Chipx Microfluidic Device (pdb code 6hw1). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Room Temperature Structure of Lipase From T. Lanuginosa at 2.5 A Resolution in Chipx Microfluidic Device, PDB code: 6hw1:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Room Temperature Structure of Lipase From T. Lanuginosa at 2.5 A Resolution in Chipx Microfluidic Device


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Room Temperature Structure of Lipase From T. Lanuginosa at 2.5 A Resolution in Chipx Microfluidic Device within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg303 b:65.9 occ:1.00 OG A:SER216 3.5 70.4 1.0 ND1 A:HIS215 3.5 70.1 1.0 N A:SER216 3.6 78.9 1.0 CD A:ARG195 3.8 58.6 1.0 CA A:HIS215 4.1 76.0 1.0 CB A:SER216 4.1 74.6 1.0 CE1 A:HIS215 4.3 63.2 1.0 O A:SER214 4.3 88.2 1.0 C A:HIS215 4.4 79.5 1.0 O A:PRO174 4.4 72.5 1.0 NE A:ARG195 4.4 59.4 1.0 CA A:SER216 4.5 74.9 1.0 N A:VAL176 4.5 63.5 1.0 CD1 A:LEU185 4.5 69.3 1.0 CG A:HIS215 4.6 79.3 1.0 CA A:ARG175 4.6 63.0 1.0 CG2 A:VAL176 4.7 86.7 1.0 CB A:HIS215 4.8 77.8 1.0 CG1 A:VAL176 4.8 76.2 1.0

Magnesium binding site 2 out of 2 in the Room Temperature Structure of Lipase From T. Lanuginosa at 2.5 A Resolution in Chipx Microfluidic Device


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Room Temperature Structure of Lipase From T. Lanuginosa at 2.5 A Resolution in Chipx Microfluidic Device within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg302 b:64.1 occ:1.00 O B:HOH409 2.2 72.1 1.0 O B:HOH419 2.4 68.3 1.0 ND1 B:HIS215 3.3 58.9 1.0 N B:SER216 3.3 76.7 1.0 OG B:SER216 3.5 62.9 1.0 CD B:ARG195 3.6 54.0 1.0 CA B:HIS215 3.9 64.8 1.0 CB B:SER216 4.0 62.4 1.0 C B:HIS215 4.1 69.9 1.0 NE B:ARG195 4.1 64.3 1.0 CE1 B:HIS215 4.1 55.0 1.0 CA B:SER216 4.3 65.6 1.0 O B:SER214 4.3 74.9 1.0 CG B:HIS215 4.3 71.9 1.0 CB B:HIS215 4.5 58.2 1.0 O B:HOH406 4.5 50.1 1.0 CD1 B:LEU185 4.5 85.3 1.0 N B:VAL176 4.6 66.3 1.0 O B:PRO174 4.6 55.2 1.0 CG1 B:VAL176 4.7 71.8 1.0 CA B:ARG175 4.8 59.5 1.0 CZ B:ARG195 4.8 63.0 1.0 N B:HIS215 4.9 61.1 1.0

R.De Wijn, O.Hennig, J.Roche, S.Engilberge, K.Rollet, P.Fernandez-Millan, K.Brillet, H.Betat, M.Morl, A.Roussel, E.Girard, C.Mueller-Dieckmann, G.C.Fox, V.Olieric, J.A.Gavira, B.Lorber, C.Sauter. A Simple and Versatile Microfluidic Device For Efficient Biomacromolecule Crystallization and Structural Analysis By Serial Crystallography. Iucrj V. 6 454 2019.
ISSN: ESSN 2052-2525
PubMed: 31098026
DOI: 10.1107/S2052252519003622