Magnesium »
PDB 6hvv-6i0u »
6hw9 »
Magnesium in PDB 6hw9: Yeast 20S Proteasome in Complex with 41B
Enzymatic activity of Yeast 20S Proteasome in Complex with 41B
All present enzymatic activity of Yeast 20S Proteasome in Complex with 41B:
3.4.25.1;
3.4.25.1;
Protein crystallography data
The structure of Yeast 20S Proteasome in Complex with 41B, PDB code: 6hw9
was solved by
E.M.Huber,
M.Groll,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 15.00 / 2.80 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 136.860, 299.890, 145.390, 90.00, 113.12, 90.00 |
| R / Rfree (%) | 17.4 / 20.5 |
Other elements in 6hw9:
The structure of Yeast 20S Proteasome in Complex with 41B also contains other interesting chemical elements:
| Chlorine | (Cl) | 2 atoms |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Yeast 20S Proteasome in Complex with 41B
(pdb code 6hw9). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 10 binding sites of Magnesium where determined in the Yeast 20S Proteasome in Complex with 41B, PDB code: 6hw9:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;
In total 10 binding sites of Magnesium where determined in the Yeast 20S Proteasome in Complex with 41B, PDB code: 6hw9:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;
Magnesium binding site 1 out of 10 in 6hw9
Go back to
Magnesium Binding Sites List in 6hw9
Magnesium binding site 1 out
of 10 in the Yeast 20S Proteasome in Complex with 41B
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Yeast 20S Proteasome in Complex with 41B within 5.0Å range:
|
Magnesium binding site 2 out of 10 in 6hw9
Go back to
Magnesium Binding Sites List in 6hw9
Magnesium binding site 2 out
of 10 in the Yeast 20S Proteasome in Complex with 41B
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Yeast 20S Proteasome in Complex with 41B within 5.0Å range:
|
Magnesium binding site 3 out of 10 in 6hw9
Go back to
Magnesium Binding Sites List in 6hw9
Magnesium binding site 3 out
of 10 in the Yeast 20S Proteasome in Complex with 41B
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Yeast 20S Proteasome in Complex with 41B within 5.0Å range:
|
Magnesium binding site 4 out of 10 in 6hw9
Go back to
Magnesium Binding Sites List in 6hw9
Magnesium binding site 4 out
of 10 in the Yeast 20S Proteasome in Complex with 41B
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Yeast 20S Proteasome in Complex with 41B within 5.0Å range:
|
Magnesium binding site 5 out of 10 in 6hw9
Go back to
Magnesium Binding Sites List in 6hw9
Magnesium binding site 5 out
of 10 in the Yeast 20S Proteasome in Complex with 41B
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Yeast 20S Proteasome in Complex with 41B within 5.0Å range:
|
Magnesium binding site 6 out of 10 in 6hw9
Go back to
Magnesium Binding Sites List in 6hw9
Magnesium binding site 6 out
of 10 in the Yeast 20S Proteasome in Complex with 41B
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Yeast 20S Proteasome in Complex with 41B within 5.0Å range:
|
Magnesium binding site 7 out of 10 in 6hw9
Go back to
Magnesium Binding Sites List in 6hw9
Magnesium binding site 7 out
of 10 in the Yeast 20S Proteasome in Complex with 41B
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Yeast 20S Proteasome in Complex with 41B within 5.0Å range:
|
Magnesium binding site 8 out of 10 in 6hw9
Go back to
Magnesium Binding Sites List in 6hw9
Magnesium binding site 8 out
of 10 in the Yeast 20S Proteasome in Complex with 41B
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Yeast 20S Proteasome in Complex with 41B within 5.0Å range:
|
Magnesium binding site 9 out of 10 in 6hw9
Go back to
Magnesium Binding Sites List in 6hw9
Magnesium binding site 9 out
of 10 in the Yeast 20S Proteasome in Complex with 41B
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Yeast 20S Proteasome in Complex with 41B within 5.0Å range:
|
Magnesium binding site 10 out of 10 in 6hw9
Go back to
Magnesium Binding Sites List in 6hw9
Magnesium binding site 10 out
of 10 in the Yeast 20S Proteasome in Complex with 41B
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Yeast 20S Proteasome in Complex with 41B within 5.0Å range:
|
Reference:
B.T.Xin,
E.M.Huber,
G.De Bruin,
W.Heinemeyer,
E.Maurits,
C.Espinal,
Y.Du,
M.Janssens,
E.S.Weyburne,
A.F.Kisselev,
B.I.Florea,
C.Driessen,
G.A.Van Der Marel,
M.Groll,
H.S.Overkleeft.
Structure-Based Design of Inhibitors Selective For Human Proteasome Beta 2C or Beta 2I Subunits. J.Med.Chem. V. 62 1626 2019.
ISSN: ISSN 0022-2623
PubMed: 30657666
DOI: 10.1021/ACS.JMEDCHEM.8B01884
Page generated: Tue Oct 1 02:41:00 2024
ISSN: ISSN 0022-2623
PubMed: 30657666
DOI: 10.1021/ACS.JMEDCHEM.8B01884
Last articles
Zn in 9JPJZn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
