Magnesium in PDB 6ig0: Type III-A Csm Complex, Cryo-Em Structure of Csm-CTR1, Atp Bound

The structure of Type III-A Csm Complex, Cryo-Em Structure of Csm-CTR1, Atp Bound also contains other interesting chemical elements:

Zinc

(Zn)

1 atom

The binding sites of Magnesium atom in the Type III-A Csm Complex, Cryo-Em Structure of Csm-CTR1, Atp Bound (pdb code 6ig0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Type III-A Csm Complex, Cryo-Em Structure of Csm-CTR1, Atp Bound, PDB code: 6ig0:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Type III-A Csm Complex, Cryo-Em Structure of Csm-CTR1, Atp Bound


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Type III-A Csm Complex, Cryo-Em Structure of Csm-CTR1, Atp Bound within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg804 b:67.1 occ:1.00 O3G A:ATP803 2.1 76.6 1.0 O3A A:ATP803 2.1 76.6 1.0 OD2 A:ASP577 2.1 59.5 1.0 MG A:MG805 2.3 80.9 1.0 PA A:ATP803 2.5 76.6 1.0 OD1 A:ASP519 2.5 57.0 1.0 O1A A:ATP803 2.6 76.6 1.0 O2A A:ATP803 3.0 76.6 1.0 O A:VAL520 3.2 59.4 1.0 CG A:ASP577 3.2 59.5 1.0 PB A:ATP803 3.3 76.6 1.0 CG A:ASP519 3.3 57.0 1.0 OD2 A:ASP519 3.3 57.0 1.0 PG A:ATP803 3.3 76.6 1.0 O3B A:ATP803 3.5 76.6 1.0 CB A:ASP577 3.7 59.5 1.0 O2B A:ATP803 3.7 76.6 1.0 O5' A:ATP803 4.0 76.6 1.0 O2G A:ATP803 4.2 76.6 1.0 OD1 A:ASP577 4.3 59.5 1.0 C A:VAL520 4.4 59.4 1.0 O1G A:ATP803 4.4 76.6 1.0 CB A:LEU523 4.4 72.3 1.0 O3' A:ATP802 4.5 82.2 1.0 O1B A:ATP803 4.5 76.6 1.0 N A:VAL520 4.7 59.4 1.0 CB A:ASP519 4.8 57.0 1.0 N A:LEU523 4.8 72.3 1.0 O2' A:ATP802 4.9 82.2 1.0 O4' A:ATP803 4.9 76.6 1.0

Magnesium binding site 2 out of 2 in the Type III-A Csm Complex, Cryo-Em Structure of Csm-CTR1, Atp Bound


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Type III-A Csm Complex, Cryo-Em Structure of Csm-CTR1, Atp Bound within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg805 b:80.9 occ:1.00 OD2 A:ASP577 2.1 59.5 1.0 O2A A:ATP803 2.1 76.6 1.0 O1A A:ATP803 2.2 76.6 1.0 O3' A:ATP802 2.2 82.2 1.0 MG A:MG804 2.3 67.1 1.0 PA A:ATP803 2.5 76.6 1.0 O2' A:ATP802 2.8 82.2 1.0 CG A:ASP577 3.3 59.5 1.0 C3' A:ATP802 3.4 82.2 1.0 O3A A:ATP803 3.4 76.6 1.0 OD2 A:ASP519 3.6 57.0 1.0 C2' A:ATP802 3.6 82.2 1.0 OD1 A:ASP519 3.7 57.0 1.0 OD1 A:ASP577 3.8 59.5 1.0 O3G A:ATP803 3.8 76.6 1.0 O5' A:ATP803 3.9 76.6 1.0 CG A:ASP519 4.0 57.0 1.0 C5' A:ATP803 4.5 76.6 1.0 CB A:ASP577 4.5 59.5 1.0 C4' A:ATP802 4.6 82.2 1.0 O3B A:ATP803 4.8 76.6 1.0 PG A:ATP803 4.8 76.6 1.0 PB A:ATP803 4.8 76.6 1.0 C1' A:ATP802 4.9 82.2 1.0 O4' A:ATP803 5.0 76.6 1.0

L.You, J.Ma, J.Wang, D.Artamonova, M.Wang, L.Liu, H.Xiang, K.Severinov, X.Zhang, Y.Wang. Structure Studies of the Crispr-Csm Complex Reveal Mechanism of Co-Transcriptional Interference Cell V. 176 239 2019.
ISSN: ISSN 1097-4172
PubMed: 30503210
DOI: 10.1016/J.CELL.2018.10.052