Magnesium in PDB 6ijo: Photosystem I of Chlamydomonas Reinhardtii

The structure of Photosystem I of Chlamydomonas Reinhardtii also contains other interesting chemical elements:

Iron

(Fe)

12 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 50; Page 6, Binding sites: 51 - 60; Page 7, Binding sites: 61 - 70; Page 8, Binding sites: 71 - 80; Page 9, Binding sites: 81 - 90; Page 10, Binding sites: 91 - 100; Page 11, Binding sites: 101 - 110; Page 12, Binding sites: 111 - 120; Page 13, Binding sites: 121 - 130; Page 14, Binding sites: 131 - 140; Page 15, Binding sites: 141 - 150; Page 16, Binding sites: 151 - 160; Page 17, Binding sites: 161 - 170; Page 18, Binding sites: 171 - 180; Page 19, Binding sites: 181 - 190; Page 20, Binding sites: 191 - 200; Page 21, Binding sites: 201 - 210; Page 22, Binding sites: 211 - 220; Page 23, Binding sites: 221 - 230; Page 24, Binding sites: 231 - 240; Page 25, Binding sites: 241 - 243;

Binding sites:

The binding sites of Magnesium atom in the Photosystem I of Chlamydomonas Reinhardtii (pdb code 6ijo). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 243 binding sites of Magnesium where determined in the Photosystem I of Chlamydomonas Reinhardtii, PDB code: 6ijo:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 243 in the Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg801 b:25.8 occ:1.00 MG A:CLA801 0.0 25.8 1.0 NB A:CLA801 2.0 25.8 1.0 ND A:CLA801 2.0 25.8 1.0 NA A:CLA801 2.1 25.8 1.0 NC A:CLA801 2.1 25.8 1.0 NE2 A:HIS676 2.3 17.9 1.0 C4D A:CLA801 2.9 25.8 1.0 C1B A:CLA801 3.0 25.8 1.0 C4A A:CLA801 3.0 25.8 1.0 C4B A:CLA801 3.0 25.8 1.0 C1C A:CLA801 3.1 25.8 1.0 C1D A:CLA801 3.1 25.8 1.0 C4C A:CLA801 3.1 25.8 1.0 C1A A:CLA801 3.1 25.8 1.0 CE1 A:HIS676 3.2 17.9 1.0 CD2 A:HIS676 3.3 17.9 1.0 CHB A:CLA801 3.4 25.8 1.0 CHA A:CLA801 3.4 25.8 1.0 CHC A:CLA801 3.4 25.8 1.0 CHD A:CLA801 3.5 25.8 1.0 CAB B:CLA802 3.7 24.9 1.0 C3B B:CLA802 4.1 24.9 1.0 C3D A:CLA801 4.2 25.8 1.0 C2B A:CLA801 4.2 25.8 1.0 C3B A:CLA801 4.3 25.8 1.0 C2D A:CLA801 4.3 25.8 1.0 C2C A:CLA801 4.3 25.8 1.0 CHC B:CLA802 4.3 24.9 1.0 C3A A:CLA801 4.3 25.8 1.0 C3C A:CLA801 4.3 25.8 1.0 ND1 A:HIS676 4.4 17.9 1.0 C4B B:CLA802 4.4 24.9 1.0 C2A A:CLA801 4.4 25.8 1.0 CG A:HIS676 4.4 17.9 1.0 CBB B:CLA802 4.7 24.9 1.0 CMA A:CLA801 4.8 25.8 1.0 CBD A:CLA801 4.8 25.8 1.0 C2B B:CLA802 4.8 24.9 1.0

Magnesium binding site 2 out of 243 in the Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg802 b:23.8 occ:1.00 MG A:CLA802 0.0 23.8 1.0 ND A:CLA802 2.0 23.8 1.0 NB A:CLA802 2.0 23.8 1.0 NC A:CLA802 2.1 23.8 1.0 NA A:CLA802 2.1 23.8 1.0 NE1 B:TRP583 2.5 20.5 1.0 C4D A:CLA802 2.9 23.8 1.0 C1B A:CLA802 3.0 23.8 1.0 C4A A:CLA802 3.0 23.8 1.0 C1C A:CLA802 3.1 23.8 1.0 C4B A:CLA802 3.1 23.8 1.0 C4C A:CLA802 3.1 23.8 1.0 C1D A:CLA802 3.1 23.8 1.0 C1A A:CLA802 3.1 23.8 1.0 SD A:MET684 3.4 20.2 1.0 CE2 B:TRP583 3.4 20.5 1.0 CHB A:CLA802 3.4 23.8 1.0 CHC A:CLA802 3.4 23.8 1.0 CHA A:CLA802 3.5 23.8 1.0 CHD A:CLA802 3.5 23.8 1.0 CZ2 B:TRP583 3.6 20.5 1.0 CD1 B:TRP583 3.7 20.5 1.0 CG A:MET684 3.9 20.2 1.0 C3D A:CLA802 4.2 23.8 1.0 C2B A:CLA802 4.3 23.8 1.0 C2D A:CLA802 4.3 23.8 1.0 C3C A:CLA802 4.3 23.8 1.0 C2C A:CLA802 4.3 23.8 1.0 C3B A:CLA802 4.3 23.8 1.0 C3A A:CLA802 4.3 23.8 1.0 CB A:MET684 4.4 20.2 1.0 C2A A:CLA802 4.4 23.8 1.0 CD2 B:TRP583 4.6 20.5 1.0 CG B:TRP583 4.8 20.5 1.0 CMC A:CLA854 4.8 28.2 1.0 CBD A:CLA802 4.9 23.8 1.0 CH2 B:TRP583 4.9 20.5 1.0 CMA A:CLA802 5.0 23.8 1.0 CE A:MET684 5.0 20.2 1.0

Magnesium binding site 3 out of 243 in the Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg803 b:22.7 occ:1.00 MG A:CLA803 0.0 22.7 1.0 NB A:CLA803 2.0 22.7 1.0 ND A:CLA803 2.0 22.7 1.0 NC A:CLA803 2.1 22.7 1.0 NA A:CLA803 2.1 22.7 1.0 C4D A:CLA803 2.9 22.7 1.0 C1B A:CLA803 2.9 22.7 1.0 C4B A:CLA803 3.0 22.7 1.0 C4A A:CLA803 3.0 22.7 1.0 C1C A:CLA803 3.0 22.7 1.0 C1D A:CLA803 3.1 22.7 1.0 C4C A:CLA803 3.1 22.7 1.0 C1A A:CLA803 3.1 22.7 1.0 CHB A:CLA803 3.4 22.7 1.0 CHC A:CLA803 3.4 22.7 1.0 CBB B:CLA803 3.4 24.2 1.0 CHA A:CLA803 3.4 22.7 1.0 CHD A:CLA803 3.5 22.7 1.0 C2B A:CLA803 4.1 22.7 1.0 CAB B:CLA803 4.1 24.2 1.0 C3B A:CLA803 4.2 22.7 1.0 C3D A:CLA803 4.2 22.7 1.0 C2C A:CLA803 4.3 22.7 1.0 C2D A:CLA803 4.3 22.7 1.0 C3C A:CLA803 4.3 22.7 1.0 C3A A:CLA803 4.4 22.7 1.0 CB B:ALA659 4.4 23.1 1.0 C2A A:CLA803 4.4 22.7 1.0 C3 A:CLA801 4.7 25.8 1.0 C2 A:CLA801 4.7 25.8 1.0 C5 A:CLA801 4.8 25.8 1.0 OD1 A:ASN601 4.8 17.4 1.0 CBD A:CLA803 4.9 22.7 1.0 C20 A:CLA801 4.9 25.8 1.0 C3B B:CLA803 4.9 24.2 1.0

Magnesium binding site 4 out of 243 in the Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg804 b:25.6 occ:1.00 MG A:CLA804 0.0 25.6 1.0 NB A:CLA804 2.0 25.6 1.0 ND A:CLA804 2.0 25.6 1.0 NC A:CLA804 2.1 25.6 1.0 NA A:CLA804 2.1 25.6 1.0 NE2 A:HIS53 2.2 25.7 1.0 C4D A:CLA804 2.9 25.6 1.0 CE1 A:HIS53 3.0 25.7 1.0 C1B A:CLA804 3.0 25.6 1.0 C4A A:CLA804 3.0 25.6 1.0 C4B A:CLA804 3.0 25.6 1.0 C1C A:CLA804 3.0 25.6 1.0 C1D A:CLA804 3.1 25.6 1.0 C4C A:CLA804 3.1 25.6 1.0 C1A A:CLA804 3.1 25.6 1.0 CHB A:CLA804 3.4 25.6 1.0 CD2 A:HIS53 3.4 25.7 1.0 CHC A:CLA804 3.4 25.6 1.0 CHA A:CLA804 3.5 25.6 1.0 CHD A:CLA804 3.5 25.6 1.0 CG J:PRO12 3.5 35.1 1.0 CB J:PRO12 3.8 35.1 1.0 ND1 A:HIS53 4.2 25.7 1.0 C3D A:CLA804 4.2 25.6 1.0 C2B A:CLA804 4.3 25.6 1.0 C3B A:CLA804 4.3 25.6 1.0 C2C A:CLA804 4.3 25.6 1.0 C2D A:CLA804 4.3 25.6 1.0 C3C A:CLA804 4.3 25.6 1.0 C3A A:CLA804 4.4 25.6 1.0 CG A:HIS53 4.4 25.7 1.0 C2A A:CLA804 4.4 25.6 1.0 CD J:PRO12 4.4 35.1 1.0 CBD A:CLA804 4.9 25.6 1.0 C29 A:BCR856 5.0 38.9 1.0 C39 A:BCR856 5.0 38.9 1.0

Magnesium binding site 5 out of 243 in the Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg805 b:19.0 occ:1.00 MG A:CLA805 0.0 19.0 1.0 NB A:CLA805 2.0 19.0 1.0 ND A:CLA805 2.0 19.0 1.0 NC A:CLA805 2.1 19.0 1.0 NA A:CLA805 2.1 19.0 1.0 NE2 A:HIS57 2.2 23.4 1.0 C4D A:CLA805 2.9 19.0 1.0 CE1 A:HIS57 2.9 23.4 1.0 C1B A:CLA805 3.0 19.0 1.0 C4A A:CLA805 3.0 19.0 1.0 C4B A:CLA805 3.1 19.0 1.0 C1C A:CLA805 3.1 19.0 1.0 C4C A:CLA805 3.1 19.0 1.0 C1D A:CLA805 3.1 19.0 1.0 C1A A:CLA805 3.1 19.0 1.0 CHB A:CLA805 3.4 19.0 1.0 CHC A:CLA805 3.4 19.0 1.0 CD2 A:HIS57 3.5 23.4 1.0 CHA A:CLA805 3.5 19.0 1.0 CHD A:CLA805 3.5 19.0 1.0 C7 A:CLA812 3.9 22.1 1.0 C5 A:CLA812 4.1 22.1 1.0 ND1 A:HIS57 4.2 23.4 1.0 C3D A:CLA805 4.2 19.0 1.0 C2B A:CLA805 4.2 19.0 1.0 C3B A:CLA805 4.3 19.0 1.0 C2C A:CLA805 4.3 19.0 1.0 C2D A:CLA805 4.3 19.0 1.0 C3C A:CLA805 4.3 19.0 1.0 C3A A:CLA805 4.4 19.0 1.0 CG A:HIS57 4.4 23.4 1.0 C2A A:CLA805 4.4 19.0 1.0 C6 A:CLA812 4.5 22.1 1.0 CBD A:CLA805 4.9 19.0 1.0 CBB A:CLA806 4.9 22.6 1.0

Magnesium binding site 6 out of 243 in the Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg806 b:22.6 occ:1.00 MG A:CLA806 0.0 22.6 1.0 NB A:CLA806 2.0 22.6 1.0 ND A:CLA806 2.0 22.6 1.0 NA A:CLA806 2.1 22.6 1.0 NC A:CLA806 2.1 22.6 1.0 NE2 A:HIS77 2.2 18.1 1.0 C4D A:CLA806 2.9 22.6 1.0 CD2 A:HIS77 2.9 18.1 1.0 C1B A:CLA806 3.0 22.6 1.0 C4A A:CLA806 3.0 22.6 1.0 C1C A:CLA806 3.0 22.6 1.0 C4B A:CLA806 3.1 22.6 1.0 C1A A:CLA806 3.1 22.6 1.0 C4C A:CLA806 3.1 22.6 1.0 C1D A:CLA806 3.1 22.6 1.0 CMB A:CLA831 3.3 24.8 1.0 CE1 A:HIS77 3.3 18.1 1.0 CHB A:CLA806 3.4 22.6 1.0 CHA A:CLA806 3.4 22.6 1.0 CHC A:CLA806 3.4 22.6 1.0 CHD A:CLA806 3.5 22.6 1.0 CG A:HIS77 4.2 18.1 1.0 C3D A:CLA806 4.2 22.6 1.0 C2B A:CLA806 4.3 22.6 1.0 C2C A:CLA806 4.3 22.6 1.0 C3B A:CLA806 4.3 22.6 1.0 ND1 A:HIS77 4.3 18.1 1.0 C2D A:CLA806 4.3 22.6 1.0 C3C A:CLA806 4.3 22.6 1.0 C3A A:CLA806 4.4 22.6 1.0 C2A A:CLA806 4.4 22.6 1.0 C2B A:CLA831 4.6 24.8 1.0 CBB A:CLA831 4.7 24.8 1.0 CBD A:CLA806 4.9 22.6 1.0

Magnesium binding site 7 out of 243 in the Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg807 b:43.2 occ:1.00 MG A:CLA807 0.0 43.2 1.0 NB A:CLA807 2.0 43.2 1.0 ND A:CLA807 2.0 43.2 1.0 NC A:CLA807 2.1 43.2 1.0 NA A:CLA807 2.1 43.2 1.0 OE1 A:GLN80 2.3 25.0 1.0 C4D A:CLA807 2.9 43.2 1.0 C1B A:CLA807 3.0 43.2 1.0 C4A A:CLA807 3.0 43.2 1.0 C4B A:CLA807 3.0 43.2 1.0 C1C A:CLA807 3.1 43.2 1.0 C1D A:CLA807 3.1 43.2 1.0 C4C A:CLA807 3.1 43.2 1.0 CD A:GLN80 3.1 25.0 1.0 C1A A:CLA807 3.1 43.2 1.0 CHB A:CLA807 3.4 43.2 1.0 CHC A:CLA807 3.4 43.2 1.0 CHA A:CLA807 3.4 43.2 1.0 CHD A:CLA807 3.5 43.2 1.0 NE2 A:GLN80 3.5 25.0 1.0 C17 A:CLA807 3.6 43.2 1.0 C3D A:CLA807 4.2 43.2 1.0 C2B A:CLA807 4.3 43.2 1.0 C3B A:CLA807 4.3 43.2 1.0 C15 A:CLA807 4.3 43.2 1.0 C2D A:CLA807 4.3 43.2 1.0 C16 A:CLA807 4.3 43.2 1.0 C2C A:CLA807 4.3 43.2 1.0 C3C A:CLA807 4.3 43.2 1.0 CG A:GLN80 4.4 25.0 1.0 C3A A:CLA807 4.4 43.2 1.0 C2A A:CLA807 4.4 43.2 1.0 C18 A:CLA807 4.7 43.2 1.0 C19 A:CLA807 4.8 43.2 1.0 CMA A:CLA806 4.9 22.6 1.0 CBD A:CLA807 4.9 43.2 1.0

Magnesium binding site 8 out of 243 in the Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg808 b:31.0 occ:1.00 MG A:CLA808 0.0 31.0 1.0 NB A:CLA808 2.0 31.0 1.0 ND A:CLA808 2.0 31.0 1.0 NA A:CLA808 2.1 31.0 1.0 NC A:CLA808 2.1 31.0 1.0 NE2 A:HIS94 2.3 30.1 1.0 C4D A:CLA808 2.9 31.0 1.0 C1B A:CLA808 3.0 31.0 1.0 CE1 A:HIS94 3.0 30.1 1.0 C4A A:CLA808 3.0 31.0 1.0 C4B A:CLA808 3.0 31.0 1.0 C1C A:CLA808 3.1 31.0 1.0 C4C A:CLA808 3.1 31.0 1.0 C1A A:CLA808 3.1 31.0 1.0 C1D A:CLA808 3.1 31.0 1.0 CHB A:CLA808 3.4 31.0 1.0 CHC A:CLA808 3.4 31.0 1.0 CD2 A:HIS94 3.4 30.1 1.0 CHA A:CLA808 3.5 31.0 1.0 CHD A:CLA808 3.5 31.0 1.0 C5 A:LMU858 4.1 39.1 1.0 ND1 A:HIS94 4.2 30.1 1.0 C4 A:LMU858 4.2 39.1 1.0 C3D A:CLA808 4.2 31.0 1.0 C2B A:CLA808 4.3 31.0 1.0 C3B A:CLA808 4.3 31.0 1.0 C2C A:CLA808 4.3 31.0 1.0 C2D A:CLA808 4.3 31.0 1.0 C3C A:CLA808 4.3 31.0 1.0 C3A A:CLA808 4.4 31.0 1.0 C2A A:CLA808 4.4 31.0 1.0 CG A:HIS94 4.5 30.1 1.0 C3 A:LMU858 4.5 39.1 1.0 C6 A:LMU858 4.6 39.1 1.0 CBD A:CLA808 4.9 31.0 1.0 CBA A:CLA808 5.0 31.0 1.0

Magnesium binding site 9 out of 243 in the Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg809 b:23.9 occ:1.00 MG A:CLA809 0.0 23.9 1.0 NB A:CLA809 2.0 23.9 1.0 ND A:CLA809 2.0 23.9 1.0 NA A:CLA809 2.1 23.9 1.0 NC A:CLA809 2.1 23.9 1.0 OE1 A:GLN116 2.2 28.9 1.0 C4D A:CLA809 2.9 23.9 1.0 C1B A:CLA809 3.0 23.9 1.0 C4A A:CLA809 3.0 23.9 1.0 C4B A:CLA809 3.1 23.9 1.0 C1C A:CLA809 3.1 23.9 1.0 C4C A:CLA809 3.1 23.9 1.0 CD A:GLN116 3.1 28.9 1.0 C1D A:CLA809 3.1 23.9 1.0 C1A A:CLA809 3.1 23.9 1.0 NE2 A:GLN116 3.3 28.9 1.0 CHB A:CLA809 3.4 23.9 1.0 CHC A:CLA809 3.4 23.9 1.0 CHA A:CLA809 3.5 23.9 1.0 CHD A:CLA809 3.5 23.9 1.0 C5 A:CLA829 4.0 24.0 1.0 C3D A:CLA809 4.2 23.9 1.0 C2B A:CLA809 4.3 23.9 1.0 C3B A:CLA809 4.3 23.9 1.0 C2C A:CLA809 4.3 23.9 1.0 C3C A:CLA809 4.3 23.9 1.0 C2D A:CLA809 4.3 23.9 1.0 C3A A:CLA809 4.4 23.9 1.0 C4 A:CLA829 4.4 24.0 1.0 C2A A:CLA809 4.4 23.9 1.0 C3 A:CLA829 4.4 24.0 1.0 C6 A:CLA829 4.5 24.0 1.0 CG A:GLN116 4.6 28.9 1.0 O1A A:CLA829 4.9 24.0 1.0 CBD A:CLA809 4.9 23.9 1.0 CBA A:CLA809 5.0 23.9 1.0

Magnesium binding site 10 out of 243 in the Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg810 b:30.3 occ:1.00 MG A:CLA810 0.0 30.3 1.0 NB A:CLA810 2.0 30.3 1.0 ND A:CLA810 2.0 30.3 1.0 NC A:CLA810 2.1 30.3 1.0 NA A:CLA810 2.1 30.3 1.0 OE1 A:GLN124 2.2 31.9 1.0 C4D A:CLA810 2.9 30.3 1.0 C1B A:CLA810 3.0 30.3 1.0 C4A A:CLA810 3.0 30.3 1.0 C4B A:CLA810 3.0 30.3 1.0 C1C A:CLA810 3.1 30.3 1.0 C1D A:CLA810 3.1 30.3 1.0 C4C A:CLA810 3.1 30.3 1.0 C1A A:CLA810 3.1 30.3 1.0 CD A:GLN124 3.2 31.9 1.0 CHB A:CLA810 3.4 30.3 1.0 CHC A:CLA810 3.4 30.3 1.0 CHA A:CLA810 3.4 30.3 1.0 NE2 A:GLN124 3.5 31.9 1.0 CHD A:CLA810 3.5 30.3 1.0 C17 A:CLA829 3.8 24.0 1.0 C3D A:CLA810 4.2 30.3 1.0 C2B A:CLA810 4.3 30.3 1.0 C3B A:CLA810 4.3 30.3 1.0 C2D A:CLA810 4.3 30.3 1.0 C2C A:CLA810 4.3 30.3 1.0 C3C A:CLA810 4.3 30.3 1.0 C3A A:CLA810 4.4 30.3 1.0 C18 A:CLA829 4.4 24.0 1.0 C2A A:CLA810 4.4 30.3 1.0 CG A:GLN124 4.6 31.9 1.0 CBD A:CLA810 4.9 30.3 1.0 CB A:GLN124 4.9 31.9 1.0

X.Su, J.Ma, X.Pan, X.Zhao, W.Chang, Z.Liu, X.Zhang, M.Li. Antenna Arrangement and Energy Transfer Pathways of A Green Algal Photosystem-I-Lhci Supercomplex. Nat Plants V. 5 273 2019.
ISSN: ESSN 2055-0278
PubMed: 30850819
DOI: 10.1038/S41477-019-0380-5