Magnesium in PDB 6jmg: Crystal Structure of Xrbj

The structure of Crystal Structure of Xrbj, PDB code: 6jmg was solved by Z.R.Gao, J.X.Qi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.70
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	107.630, 107.630, 320.247, 90.00, 90.00, 120.00
R / Rfree (%)	20.8 / 25.5

The binding sites of Magnesium atom in the Crystal Structure of Xrbj (pdb code 6jmg). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Xrbj, PDB code: 6jmg:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of Xrbj


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Xrbj within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg302 b:57.0 occ:1.00 O1G A:GTP301 1.9 47.1 1.0 OG A:SER30 2.0 47.7 1.0 O2B A:GTP301 2.0 47.5 1.0 O A:HOH401 2.1 56.7 1.0 OG1 A:THR48 2.1 53.8 1.0 O A:HOH406 2.1 48.2 1.0 CB A:SER30 3.2 48.3 1.0 PG A:GTP301 3.2 61.3 1.0 PB A:GTP301 3.2 63.8 1.0 CB A:THR48 3.3 63.4 1.0 O3B A:GTP301 3.6 64.6 1.0 N A:SER30 3.7 47.8 1.0 N A:THR48 3.7 54.0 1.0 OD2 A:ASP71 3.9 61.6 1.0 CA A:SER30 4.0 50.2 1.0 O2G A:GTP301 4.0 46.6 1.0 OD1 A:ASP71 4.1 61.6 1.0 CA A:THR48 4.1 53.7 1.0 O A:HOH404 4.1 67.6 1.0 O1B A:GTP301 4.2 52.0 1.0 O2A A:GTP301 4.2 59.2 1.0 O3G A:GTP301 4.3 57.1 1.0 CG A:ASP71 4.4 63.8 1.0 O3A A:GTP301 4.4 69.9 1.0 CG2 A:THR48 4.5 46.6 1.0 O A:MET72 4.5 74.1 1.0 PA A:GTP301 4.6 59.8 1.0 O1A A:GTP301 4.7 54.3 1.0 O A:GLN46 4.7 59.6 1.0 CB A:LYS29 4.7 46.7 1.0 C A:LYS29 4.8 57.2 1.0 C A:ALA47 4.8 59.3 1.0 CE A:LYS29 5.0 54.0 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of Xrbj


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Xrbj within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg302 b:58.6 occ:1.00 O3G B:GTP301 2.0 51.6 1.0 OG B:SER30 2.0 52.1 1.0 O B:HOH401 2.0 48.6 1.0 O B:HOH402 2.1 56.5 1.0 O2B B:GTP301 2.1 47.7 1.0 OG1 B:THR48 2.2 57.5 1.0 CB B:THR48 3.1 62.2 1.0 PG B:GTP301 3.2 59.6 1.0 CB B:SER30 3.2 57.9 1.0 PB B:GTP301 3.4 62.5 1.0 O3B B:GTP301 3.6 59.0 1.0 N B:THR48 3.7 62.1 1.0 O1G B:GTP301 3.8 82.4 1.0 OD2 B:ASP71 3.8 68.5 1.0 CA B:THR48 4.0 50.0 1.0 O2A B:GTP301 4.0 68.9 1.0 N B:SER30 4.0 61.8 1.0 O B:HOH403 4.1 68.9 1.0 CA B:SER30 4.2 56.0 1.0 CG2 B:THR48 4.3 57.0 1.0 OD1 B:ASP71 4.3 65.0 1.0 O1B B:GTP301 4.4 55.1 1.0 O2G B:GTP301 4.4 62.6 1.0 O3A B:GTP301 4.4 74.0 1.0 NZ B:LYS29 4.4 93.0 1.0 CG B:ASP71 4.5 65.6 1.0 CE B:LYS29 4.5 73.7 1.0 O B:MET72 4.6 60.8 1.0 PA B:GTP301 4.6 66.8 1.0 O1A B:GTP301 4.7 70.6 1.0 O B:GLN46 4.7 62.5 1.0 C B:ALA47 4.9 66.3 1.0

Z.R.Gao, J.X.Qi. Crystal Structure of Rbj To Be Published.