Magnesium in PDB 6jo6: Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I
Enzymatic activity of Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I
All present enzymatic activity of Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I:
1.97.1.12;
Other elements in 6jo6:
The structure of Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I also contains other interesting chemical elements:
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
40;
Page 5, Binding sites: 41 -
50;
Page 6, Binding sites: 51 -
60;
Page 7, Binding sites: 61 -
70;
Page 8, Binding sites: 71 -
80;
Page 9, Binding sites: 81 -
90;
Page 10, Binding sites: 91 -
100;
Page 11, Binding sites: 101 -
110;
Page 12, Binding sites: 111 -
120;
Page 13, Binding sites: 121 -
130;
Page 14, Binding sites: 131 -
140;
Page 15, Binding sites: 141 -
150;
Page 16, Binding sites: 151 -
160;
Page 17, Binding sites: 161 -
170;
Page 18, Binding sites: 171 -
180;
Page 19, Binding sites: 181 -
190;
Page 20, Binding sites: 191 -
200;
Page 21, Binding sites: 201 -
210;
Page 22, Binding sites: 211 -
216;
Binding sites:
The binding sites of Magnesium atom in the Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I
(pdb code 6jo6). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 216 binding sites of Magnesium where determined in the
Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I, PDB code: 6jo6:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 216 in 6jo6
Go back to
Magnesium Binding Sites List in 6jo6
Magnesium binding site 1 out
of 216 in the Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg801
b:29.5
occ:1.00
|
MG
|
A:CL0801
|
0.0
|
29.5
|
1.0
|
ND
|
A:CL0801
|
2.0
|
29.5
|
1.0
|
NB
|
A:CL0801
|
2.0
|
29.5
|
1.0
|
NC
|
A:CL0801
|
2.1
|
29.5
|
1.0
|
NA
|
A:CL0801
|
2.1
|
29.5
|
1.0
|
NE2
|
A:HIS676
|
2.1
|
15.0
|
1.0
|
C4A
|
A:CL0801
|
3.0
|
29.5
|
1.0
|
C4D
|
A:CL0801
|
3.0
|
29.5
|
1.0
|
CE1
|
A:HIS676
|
3.0
|
15.0
|
1.0
|
C1C
|
A:CL0801
|
3.0
|
29.5
|
1.0
|
C1B
|
A:CL0801
|
3.0
|
29.5
|
1.0
|
C4B
|
A:CL0801
|
3.0
|
29.5
|
1.0
|
C1A
|
A:CL0801
|
3.1
|
29.5
|
1.0
|
C4C
|
A:CL0801
|
3.1
|
29.5
|
1.0
|
CD2
|
A:HIS676
|
3.2
|
15.0
|
1.0
|
C1D
|
A:CL0801
|
3.2
|
29.5
|
1.0
|
CHB
|
A:CL0801
|
3.4
|
29.5
|
1.0
|
CHC
|
A:CL0801
|
3.4
|
29.5
|
1.0
|
CHA
|
A:CL0801
|
3.5
|
29.5
|
1.0
|
CHD
|
A:CL0801
|
3.7
|
29.5
|
1.0
|
CAB
|
B:CLA802
|
4.1
|
29.5
|
1.0
|
ND1
|
A:HIS676
|
4.2
|
15.0
|
1.0
|
C3B
|
B:CLA802
|
4.2
|
29.5
|
1.0
|
C3D
|
A:CL0801
|
4.3
|
29.5
|
1.0
|
CG
|
A:HIS676
|
4.3
|
15.0
|
1.0
|
C3A
|
A:CL0801
|
4.3
|
29.5
|
1.0
|
C2B
|
A:CL0801
|
4.4
|
29.5
|
1.0
|
C3B
|
A:CL0801
|
4.4
|
29.5
|
1.0
|
C2C
|
A:CL0801
|
4.4
|
29.5
|
1.0
|
C2A
|
A:CL0801
|
4.4
|
29.5
|
1.0
|
C3C
|
A:CL0801
|
4.4
|
29.5
|
1.0
|
C2D
|
A:CL0801
|
4.5
|
29.5
|
1.0
|
C4B
|
B:CLA802
|
4.5
|
29.5
|
1.0
|
CHC
|
B:CLA802
|
4.6
|
29.5
|
1.0
|
CMA
|
A:CL0801
|
4.8
|
29.5
|
1.0
|
CZ
|
A:PHE672
|
4.9
|
14.8
|
1.0
|
CBD
|
A:CL0801
|
5.0
|
29.5
|
1.0
|
C2B
|
B:CLA802
|
5.0
|
29.5
|
1.0
|
|
Magnesium binding site 2 out
of 216 in 6jo6
Go back to
Magnesium Binding Sites List in 6jo6
Magnesium binding site 2 out
of 216 in the Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg802
b:19.0
occ:1.00
|
MG
|
A:CLA802
|
0.0
|
19.0
|
1.0
|
ND
|
A:CLA802
|
2.0
|
19.0
|
1.0
|
NB
|
A:CLA802
|
2.0
|
19.0
|
1.0
|
NC
|
A:CLA802
|
2.1
|
19.0
|
1.0
|
NA
|
A:CLA802
|
2.1
|
19.0
|
1.0
|
SD
|
A:MET684
|
2.4
|
15.9
|
1.0
|
C4A
|
A:CLA802
|
3.0
|
19.0
|
1.0
|
C1B
|
A:CLA802
|
3.0
|
19.0
|
1.0
|
C4D
|
A:CLA802
|
3.0
|
19.0
|
1.0
|
C1C
|
A:CLA802
|
3.0
|
19.0
|
1.0
|
C4B
|
A:CLA802
|
3.0
|
19.0
|
1.0
|
C1A
|
A:CLA802
|
3.1
|
19.0
|
1.0
|
C4C
|
A:CLA802
|
3.1
|
19.0
|
1.0
|
C1D
|
A:CLA802
|
3.2
|
19.0
|
1.0
|
CHB
|
A:CLA802
|
3.3
|
19.0
|
1.0
|
CHC
|
A:CLA802
|
3.4
|
19.0
|
1.0
|
CG
|
A:MET684
|
3.4
|
15.9
|
1.0
|
CZ2
|
B:TRP583
|
3.5
|
12.6
|
1.0
|
CHA
|
A:CLA802
|
3.5
|
19.0
|
1.0
|
CE
|
A:MET684
|
3.6
|
15.9
|
1.0
|
CHD
|
A:CLA802
|
3.6
|
19.0
|
1.0
|
CB
|
A:MET684
|
3.9
|
15.9
|
1.0
|
NE1
|
B:TRP583
|
3.9
|
12.6
|
1.0
|
CE2
|
B:TRP583
|
4.0
|
12.6
|
1.0
|
C3D
|
A:CLA802
|
4.3
|
19.0
|
1.0
|
C2B
|
A:CLA802
|
4.3
|
19.0
|
1.0
|
C3B
|
A:CLA802
|
4.3
|
19.0
|
1.0
|
C3A
|
A:CLA802
|
4.3
|
19.0
|
1.0
|
C2C
|
A:CLA802
|
4.3
|
19.0
|
1.0
|
C3C
|
A:CLA802
|
4.4
|
19.0
|
1.0
|
C2A
|
A:CLA802
|
4.4
|
19.0
|
1.0
|
C2D
|
A:CLA802
|
4.5
|
19.0
|
1.0
|
CH2
|
B:TRP583
|
4.6
|
12.6
|
1.0
|
CH2
|
A:TRP693
|
4.9
|
9.5
|
1.0
|
CBD
|
A:CLA802
|
4.9
|
19.0
|
1.0
|
CMA
|
A:CLA802
|
5.0
|
19.0
|
1.0
|
|
Magnesium binding site 3 out
of 216 in 6jo6
Go back to
Magnesium Binding Sites List in 6jo6
Magnesium binding site 3 out
of 216 in the Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg803
b:20.7
occ:1.00
|
MG
|
A:CLA803
|
0.0
|
20.7
|
1.0
|
ND
|
A:CLA803
|
2.0
|
20.7
|
1.0
|
NB
|
A:CLA803
|
2.0
|
20.7
|
1.0
|
NC
|
A:CLA803
|
2.1
|
20.7
|
1.0
|
NA
|
A:CLA803
|
2.1
|
20.7
|
1.0
|
C4D
|
A:CLA803
|
3.0
|
20.7
|
1.0
|
C1C
|
A:CLA803
|
3.0
|
20.7
|
1.0
|
C4B
|
A:CLA803
|
3.0
|
20.7
|
1.0
|
C1B
|
A:CLA803
|
3.0
|
20.7
|
1.0
|
C4A
|
A:CLA803
|
3.0
|
20.7
|
1.0
|
C1A
|
A:CLA803
|
3.1
|
20.7
|
1.0
|
C4C
|
A:CLA803
|
3.1
|
20.7
|
1.0
|
C1D
|
A:CLA803
|
3.3
|
20.7
|
1.0
|
CHC
|
A:CLA803
|
3.4
|
20.7
|
1.0
|
CHB
|
A:CLA803
|
3.4
|
20.7
|
1.0
|
CBB
|
B:CLA803
|
3.4
|
15.9
|
1.0
|
CHA
|
A:CLA803
|
3.4
|
20.7
|
1.0
|
CHD
|
A:CLA803
|
3.7
|
20.7
|
1.0
|
C3D
|
A:CLA803
|
4.2
|
20.7
|
1.0
|
CAB
|
B:CLA803
|
4.2
|
15.9
|
1.0
|
C3B
|
A:CLA803
|
4.3
|
20.7
|
1.0
|
C2B
|
A:CLA803
|
4.3
|
20.7
|
1.0
|
C2C
|
A:CLA803
|
4.3
|
20.7
|
1.0
|
C3C
|
A:CLA803
|
4.4
|
20.7
|
1.0
|
C3A
|
A:CLA803
|
4.4
|
20.7
|
1.0
|
C2A
|
A:CLA803
|
4.4
|
20.7
|
1.0
|
OD1
|
A:ASN601
|
4.4
|
14.0
|
1.0
|
C2D
|
A:CLA803
|
4.5
|
20.7
|
1.0
|
CB
|
B:ALA659
|
4.6
|
13.3
|
1.0
|
C2
|
A:CL0801
|
4.6
|
29.5
|
1.0
|
C20
|
A:CL0801
|
4.8
|
29.5
|
1.0
|
C3
|
A:CL0801
|
4.8
|
29.5
|
1.0
|
ND2
|
A:ASN601
|
4.8
|
14.0
|
1.0
|
CBD
|
A:CLA803
|
4.9
|
20.7
|
1.0
|
C1
|
A:CL0801
|
4.9
|
29.5
|
1.0
|
CG
|
A:ASN601
|
4.9
|
14.0
|
1.0
|
C3B
|
B:CLA803
|
5.0
|
15.9
|
1.0
|
|
Magnesium binding site 4 out
of 216 in 6jo6
Go back to
Magnesium Binding Sites List in 6jo6
Magnesium binding site 4 out
of 216 in the Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg804
b:14.8
occ:1.00
|
MG
|
A:CLA804
|
0.0
|
14.8
|
1.0
|
ND
|
A:CLA804
|
2.0
|
14.8
|
1.0
|
NB
|
A:CLA804
|
2.0
|
14.8
|
1.0
|
NC
|
A:CLA804
|
2.1
|
14.8
|
1.0
|
NE2
|
A:HIS53
|
2.1
|
16.9
|
1.0
|
NA
|
A:CLA804
|
2.1
|
14.8
|
1.0
|
C4D
|
A:CLA804
|
3.0
|
14.8
|
1.0
|
CD2
|
A:HIS53
|
3.0
|
16.9
|
1.0
|
C1C
|
A:CLA804
|
3.0
|
14.8
|
1.0
|
C4A
|
A:CLA804
|
3.0
|
14.8
|
1.0
|
C1B
|
A:CLA804
|
3.0
|
14.8
|
1.0
|
C4B
|
A:CLA804
|
3.0
|
14.8
|
1.0
|
C1A
|
A:CLA804
|
3.1
|
14.8
|
1.0
|
CE1
|
A:HIS53
|
3.1
|
16.9
|
1.0
|
C4C
|
A:CLA804
|
3.1
|
14.8
|
1.0
|
C1D
|
A:CLA804
|
3.2
|
14.8
|
1.0
|
CHC
|
A:CLA804
|
3.4
|
14.8
|
1.0
|
CHB
|
A:CLA804
|
3.4
|
14.8
|
1.0
|
CHA
|
A:CLA804
|
3.5
|
14.8
|
1.0
|
CHD
|
A:CLA804
|
3.7
|
14.8
|
1.0
|
CG
|
J:PRO12
|
3.8
|
19.5
|
1.0
|
CB
|
J:PRO12
|
4.1
|
19.5
|
1.0
|
CG
|
A:HIS53
|
4.2
|
16.9
|
1.0
|
ND1
|
A:HIS53
|
4.2
|
16.9
|
1.0
|
C3D
|
A:CLA804
|
4.2
|
14.8
|
1.0
|
C2C
|
A:CLA804
|
4.4
|
14.8
|
1.0
|
C3B
|
A:CLA804
|
4.4
|
14.8
|
1.0
|
C2B
|
A:CLA804
|
4.4
|
14.8
|
1.0
|
C3A
|
A:CLA804
|
4.4
|
14.8
|
1.0
|
C2A
|
A:CLA804
|
4.4
|
14.8
|
1.0
|
C3C
|
A:CLA804
|
4.4
|
14.8
|
1.0
|
C2D
|
A:CLA804
|
4.5
|
14.8
|
1.0
|
CD
|
J:PRO12
|
4.7
|
19.5
|
1.0
|
C29
|
A:BCR856
|
4.7
|
19.2
|
1.0
|
CBD
|
A:CLA804
|
4.9
|
14.8
|
1.0
|
CAA
|
A:CLA804
|
5.0
|
14.8
|
1.0
|
|
Magnesium binding site 5 out
of 216 in 6jo6
Go back to
Magnesium Binding Sites List in 6jo6
Magnesium binding site 5 out
of 216 in the Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg805
b:16.2
occ:1.00
|
MG
|
A:CLA805
|
0.0
|
16.2
|
1.0
|
NE2
|
A:HIS57
|
2.0
|
17.4
|
1.0
|
ND
|
A:CLA805
|
2.0
|
16.2
|
1.0
|
NB
|
A:CLA805
|
2.0
|
16.2
|
1.0
|
NC
|
A:CLA805
|
2.1
|
16.2
|
1.0
|
NA
|
A:CLA805
|
2.1
|
16.2
|
1.0
|
CE1
|
A:HIS57
|
2.7
|
17.4
|
1.0
|
C4D
|
A:CLA805
|
3.0
|
16.2
|
1.0
|
C1C
|
A:CLA805
|
3.0
|
16.2
|
1.0
|
C4A
|
A:CLA805
|
3.0
|
16.2
|
1.0
|
C1B
|
A:CLA805
|
3.0
|
16.2
|
1.0
|
C4B
|
A:CLA805
|
3.1
|
16.2
|
1.0
|
C1A
|
A:CLA805
|
3.1
|
16.2
|
1.0
|
C4C
|
A:CLA805
|
3.1
|
16.2
|
1.0
|
CD2
|
A:HIS57
|
3.2
|
17.4
|
1.0
|
C1D
|
A:CLA805
|
3.3
|
16.2
|
1.0
|
CHB
|
A:CLA805
|
3.4
|
16.2
|
1.0
|
CHC
|
A:CLA805
|
3.4
|
16.2
|
1.0
|
CHA
|
A:CLA805
|
3.5
|
16.2
|
1.0
|
CHD
|
A:CLA805
|
3.7
|
16.2
|
1.0
|
ND1
|
A:HIS57
|
4.0
|
17.4
|
1.0
|
C7
|
A:CLA812
|
4.0
|
23.3
|
1.0
|
CG
|
A:HIS57
|
4.2
|
17.4
|
1.0
|
C3D
|
A:CLA805
|
4.3
|
16.2
|
1.0
|
C2C
|
A:CLA805
|
4.3
|
16.2
|
1.0
|
C2B
|
A:CLA805
|
4.3
|
16.2
|
1.0
|
C3B
|
A:CLA805
|
4.3
|
16.2
|
1.0
|
C3A
|
A:CLA805
|
4.4
|
16.2
|
1.0
|
C3C
|
A:CLA805
|
4.4
|
16.2
|
1.0
|
C2A
|
A:CLA805
|
4.4
|
16.2
|
1.0
|
C2D
|
A:CLA805
|
4.5
|
16.2
|
1.0
|
C10
|
A:CLA812
|
4.8
|
23.3
|
1.0
|
CBB
|
A:CLA806
|
4.9
|
10.9
|
1.0
|
CBD
|
A:CLA805
|
4.9
|
16.2
|
1.0
|
CMA
|
A:CLA805
|
5.0
|
16.2
|
1.0
|
C8
|
A:CLA812
|
5.0
|
23.3
|
1.0
|
|
Magnesium binding site 6 out
of 216 in 6jo6
Go back to
Magnesium Binding Sites List in 6jo6
Magnesium binding site 6 out
of 216 in the Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg806
b:10.9
occ:1.00
|
MG
|
A:CLA806
|
0.0
|
10.9
|
1.0
|
NE2
|
A:HIS77
|
1.9
|
11.7
|
1.0
|
ND
|
A:CLA806
|
2.0
|
10.9
|
1.0
|
NB
|
A:CLA806
|
2.0
|
10.9
|
1.0
|
NC
|
A:CLA806
|
2.1
|
10.9
|
1.0
|
NA
|
A:CLA806
|
2.1
|
10.9
|
1.0
|
CD2
|
A:HIS77
|
2.6
|
11.7
|
1.0
|
C4D
|
A:CLA806
|
3.0
|
10.9
|
1.0
|
C1C
|
A:CLA806
|
3.0
|
10.9
|
1.0
|
C4A
|
A:CLA806
|
3.0
|
10.9
|
1.0
|
C4B
|
A:CLA806
|
3.0
|
10.9
|
1.0
|
CE1
|
A:HIS77
|
3.0
|
11.7
|
1.0
|
C1B
|
A:CLA806
|
3.1
|
10.9
|
1.0
|
C1A
|
A:CLA806
|
3.1
|
10.9
|
1.0
|
C4C
|
A:CLA806
|
3.1
|
10.9
|
1.0
|
C1D
|
A:CLA806
|
3.3
|
10.9
|
1.0
|
CHB
|
A:CLA806
|
3.4
|
10.9
|
1.0
|
CHC
|
A:CLA806
|
3.4
|
10.9
|
1.0
|
CMB
|
A:CLA831
|
3.4
|
10.2
|
1.0
|
CHA
|
A:CLA806
|
3.5
|
10.9
|
1.0
|
CHD
|
A:CLA806
|
3.7
|
10.9
|
1.0
|
CG
|
A:HIS77
|
3.8
|
11.7
|
1.0
|
ND1
|
A:HIS77
|
4.0
|
11.7
|
1.0
|
C3D
|
A:CLA806
|
4.3
|
10.9
|
1.0
|
C2C
|
A:CLA806
|
4.3
|
10.9
|
1.0
|
C3B
|
A:CLA806
|
4.4
|
10.9
|
1.0
|
C3A
|
A:CLA806
|
4.4
|
10.9
|
1.0
|
C2A
|
A:CLA806
|
4.4
|
10.9
|
1.0
|
C2B
|
A:CLA806
|
4.4
|
10.9
|
1.0
|
C3C
|
A:CLA806
|
4.4
|
10.9
|
1.0
|
C2D
|
A:CLA806
|
4.5
|
10.9
|
1.0
|
C2B
|
A:CLA831
|
4.8
|
10.2
|
1.0
|
CBD
|
A:CLA806
|
4.9
|
10.9
|
1.0
|
O
|
A:VAL73
|
5.0
|
15.1
|
1.0
|
|
Magnesium binding site 7 out
of 216 in 6jo6
Go back to
Magnesium Binding Sites List in 6jo6
Magnesium binding site 7 out
of 216 in the Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg807
b:29.5
occ:1.00
|
MG
|
A:CLA807
|
0.0
|
29.5
|
1.0
|
ND
|
A:CLA807
|
2.0
|
29.5
|
1.0
|
NB
|
A:CLA807
|
2.0
|
29.5
|
1.0
|
NC
|
A:CLA807
|
2.1
|
29.5
|
1.0
|
NA
|
A:CLA807
|
2.1
|
29.5
|
1.0
|
OE1
|
A:GLN80
|
2.2
|
17.6
|
1.0
|
C4D
|
A:CLA807
|
3.0
|
29.5
|
1.0
|
C1C
|
A:CLA807
|
3.0
|
29.5
|
1.0
|
C4A
|
A:CLA807
|
3.0
|
29.5
|
1.0
|
C4B
|
A:CLA807
|
3.0
|
29.5
|
1.0
|
C1B
|
A:CLA807
|
3.0
|
29.5
|
1.0
|
C1A
|
A:CLA807
|
3.1
|
29.5
|
1.0
|
CD
|
A:GLN80
|
3.1
|
17.6
|
1.0
|
C4C
|
A:CLA807
|
3.1
|
29.5
|
1.0
|
C1D
|
A:CLA807
|
3.3
|
29.5
|
1.0
|
CHB
|
A:CLA807
|
3.4
|
29.5
|
1.0
|
CHC
|
A:CLA807
|
3.4
|
29.5
|
1.0
|
CHA
|
A:CLA807
|
3.5
|
29.5
|
1.0
|
C16
|
A:CLA807
|
3.5
|
29.5
|
1.0
|
NE2
|
A:GLN80
|
3.6
|
17.6
|
1.0
|
C17
|
A:CLA807
|
3.6
|
29.5
|
1.0
|
CHD
|
A:CLA807
|
3.7
|
29.5
|
1.0
|
C3D
|
A:CLA807
|
4.2
|
29.5
|
1.0
|
C3B
|
A:CLA807
|
4.4
|
29.5
|
1.0
|
C2C
|
A:CLA807
|
4.4
|
29.5
|
1.0
|
C2B
|
A:CLA807
|
4.4
|
29.5
|
1.0
|
C3A
|
A:CLA807
|
4.4
|
29.5
|
1.0
|
C2A
|
A:CLA807
|
4.4
|
29.5
|
1.0
|
C3C
|
A:CLA807
|
4.4
|
29.5
|
1.0
|
CG
|
A:GLN80
|
4.4
|
17.6
|
1.0
|
C2D
|
A:CLA807
|
4.5
|
29.5
|
1.0
|
CMA
|
A:CLA806
|
4.6
|
10.9
|
1.0
|
C18
|
A:CLA807
|
4.7
|
29.5
|
1.0
|
C19
|
A:CLA807
|
4.9
|
29.5
|
1.0
|
CBD
|
A:CLA807
|
4.9
|
29.5
|
1.0
|
|
Magnesium binding site 8 out
of 216 in 6jo6
Go back to
Magnesium Binding Sites List in 6jo6
Magnesium binding site 8 out
of 216 in the Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg808
b:20.8
occ:1.00
|
MG
|
A:CLA808
|
0.0
|
20.8
|
1.0
|
NE2
|
A:HIS94
|
2.0
|
17.5
|
1.0
|
ND
|
A:CLA808
|
2.0
|
20.8
|
1.0
|
NB
|
A:CLA808
|
2.0
|
20.8
|
1.0
|
NC
|
A:CLA808
|
2.1
|
20.8
|
1.0
|
NA
|
A:CLA808
|
2.1
|
20.8
|
1.0
|
CE1
|
A:HIS94
|
2.9
|
17.5
|
1.0
|
C4D
|
A:CLA808
|
3.0
|
20.8
|
1.0
|
C1C
|
A:CLA808
|
3.0
|
20.8
|
1.0
|
C4A
|
A:CLA808
|
3.0
|
20.8
|
1.0
|
C4B
|
A:CLA808
|
3.0
|
20.8
|
1.0
|
C1B
|
A:CLA808
|
3.0
|
20.8
|
1.0
|
C1A
|
A:CLA808
|
3.1
|
20.8
|
1.0
|
C4C
|
A:CLA808
|
3.1
|
20.8
|
1.0
|
CD2
|
A:HIS94
|
3.2
|
17.5
|
1.0
|
C1D
|
A:CLA808
|
3.3
|
20.8
|
1.0
|
CHC
|
A:CLA808
|
3.4
|
20.8
|
1.0
|
CHB
|
A:CLA808
|
3.4
|
20.8
|
1.0
|
CHA
|
A:CLA808
|
3.5
|
20.8
|
1.0
|
CHD
|
A:CLA808
|
3.7
|
20.8
|
1.0
|
ND1
|
A:HIS94
|
4.1
|
17.5
|
1.0
|
CG
|
A:HIS94
|
4.2
|
17.5
|
1.0
|
C3D
|
A:CLA808
|
4.3
|
20.8
|
1.0
|
C2C
|
A:CLA808
|
4.4
|
20.8
|
1.0
|
C3B
|
A:CLA808
|
4.4
|
20.8
|
1.0
|
C2B
|
A:CLA808
|
4.4
|
20.8
|
1.0
|
C3A
|
A:CLA808
|
4.4
|
20.8
|
1.0
|
C2A
|
A:CLA808
|
4.4
|
20.8
|
1.0
|
C3C
|
A:CLA808
|
4.4
|
20.8
|
1.0
|
C2D
|
A:CLA808
|
4.5
|
20.8
|
1.0
|
CBD
|
A:CLA808
|
4.9
|
20.8
|
1.0
|
|
Magnesium binding site 9 out
of 216 in 6jo6
Go back to
Magnesium Binding Sites List in 6jo6
Magnesium binding site 9 out
of 216 in the Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg809
b:13.4
occ:1.00
|
MG
|
A:CLA809
|
0.0
|
13.4
|
1.0
|
ND
|
A:CLA809
|
2.0
|
13.4
|
1.0
|
NB
|
A:CLA809
|
2.0
|
13.4
|
1.0
|
NC
|
A:CLA809
|
2.1
|
13.4
|
1.0
|
NA
|
A:CLA809
|
2.1
|
13.4
|
1.0
|
OE1
|
A:GLN116
|
2.2
|
18.1
|
1.0
|
C4D
|
A:CLA809
|
3.0
|
13.4
|
1.0
|
C1C
|
A:CLA809
|
3.0
|
13.4
|
1.0
|
C4A
|
A:CLA809
|
3.0
|
13.4
|
1.0
|
C1B
|
A:CLA809
|
3.0
|
13.4
|
1.0
|
C4B
|
A:CLA809
|
3.0
|
13.4
|
1.0
|
CD
|
A:GLN116
|
3.1
|
18.1
|
1.0
|
C1A
|
A:CLA809
|
3.1
|
13.4
|
1.0
|
C4C
|
A:CLA809
|
3.1
|
13.4
|
1.0
|
C1D
|
A:CLA809
|
3.3
|
13.4
|
1.0
|
NE2
|
A:GLN116
|
3.3
|
18.1
|
1.0
|
CHB
|
A:CLA809
|
3.4
|
13.4
|
1.0
|
CHC
|
A:CLA809
|
3.4
|
13.4
|
1.0
|
CHA
|
A:CLA809
|
3.5
|
13.4
|
1.0
|
CHD
|
A:CLA809
|
3.7
|
13.4
|
1.0
|
C7
|
A:CLA829
|
4.1
|
15.4
|
1.0
|
C3D
|
A:CLA809
|
4.3
|
13.4
|
1.0
|
C3B
|
A:CLA809
|
4.3
|
13.4
|
1.0
|
C2B
|
A:CLA809
|
4.3
|
13.4
|
1.0
|
C2C
|
A:CLA809
|
4.4
|
13.4
|
1.0
|
C3A
|
A:CLA809
|
4.4
|
13.4
|
1.0
|
C2A
|
A:CLA809
|
4.4
|
13.4
|
1.0
|
C3C
|
A:CLA809
|
4.4
|
13.4
|
1.0
|
C6
|
A:CLA829
|
4.4
|
15.4
|
1.0
|
CG
|
A:GLN116
|
4.5
|
18.1
|
1.0
|
C2D
|
A:CLA809
|
4.5
|
13.4
|
1.0
|
C2
|
A:CLA829
|
4.5
|
15.4
|
1.0
|
C1
|
A:CLA829
|
4.9
|
15.4
|
1.0
|
CBD
|
A:CLA809
|
4.9
|
13.4
|
1.0
|
|
Magnesium binding site 10 out
of 216 in 6jo6
Go back to
Magnesium Binding Sites List in 6jo6
Magnesium binding site 10 out
of 216 in the Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Structure of the Green Algal Photosystem I Supercomplex with Light- Harvesting Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg810
b:18.0
occ:1.00
|
MG
|
A:CLA810
|
0.0
|
18.0
|
1.0
|
ND
|
A:CLA810
|
2.0
|
18.0
|
1.0
|
NB
|
A:CLA810
|
2.0
|
18.0
|
1.0
|
NC
|
A:CLA810
|
2.1
|
18.0
|
1.0
|
NA
|
A:CLA810
|
2.1
|
18.0
|
1.0
|
OE1
|
A:GLN124
|
2.1
|
19.1
|
1.0
|
C4D
|
A:CLA810
|
3.0
|
18.0
|
1.0
|
C1C
|
A:CLA810
|
3.0
|
18.0
|
1.0
|
C1B
|
A:CLA810
|
3.0
|
18.0
|
1.0
|
C4B
|
A:CLA810
|
3.0
|
18.0
|
1.0
|
C4A
|
A:CLA810
|
3.0
|
18.0
|
1.0
|
C1A
|
A:CLA810
|
3.1
|
18.0
|
1.0
|
CD
|
A:GLN124
|
3.1
|
19.1
|
1.0
|
C4C
|
A:CLA810
|
3.2
|
18.0
|
1.0
|
C1D
|
A:CLA810
|
3.2
|
18.0
|
1.0
|
CHB
|
A:CLA810
|
3.4
|
18.0
|
1.0
|
CHC
|
A:CLA810
|
3.4
|
18.0
|
1.0
|
CHA
|
A:CLA810
|
3.5
|
18.0
|
1.0
|
C20
|
A:CLA829
|
3.5
|
15.4
|
1.0
|
NE2
|
A:GLN124
|
3.5
|
19.1
|
1.0
|
CHD
|
A:CLA810
|
3.7
|
18.0
|
1.0
|
C18
|
A:CLA829
|
4.2
|
15.4
|
1.0
|
C3D
|
A:CLA810
|
4.3
|
18.0
|
1.0
|
C3B
|
A:CLA810
|
4.3
|
18.0
|
1.0
|
C2B
|
A:CLA810
|
4.3
|
18.0
|
1.0
|
C2C
|
A:CLA810
|
4.4
|
18.0
|
1.0
|
C3A
|
A:CLA810
|
4.4
|
18.0
|
1.0
|
CG
|
A:GLN124
|
4.4
|
19.1
|
1.0
|
C2A
|
A:CLA810
|
4.4
|
18.0
|
1.0
|
C3C
|
A:CLA810
|
4.4
|
18.0
|
1.0
|
C2D
|
A:CLA810
|
4.5
|
18.0
|
1.0
|
CB
|
A:GLN124
|
4.6
|
19.1
|
1.0
|
C19
|
A:CLA829
|
4.6
|
15.4
|
1.0
|
CBD
|
A:CLA810
|
4.9
|
18.0
|
1.0
|
|
Reference:
M.Suga,
S.I.Ozawa,
K.Yoshida-Motomura,
F.Akita,
N.Miyazaki,
Y.Takahashi.
Structure of the Green Algal Photosystem I Supercomplex with A Decameric Light-Harvesting Complex I. Nat.Plants V. 5 626 2019.
ISSN: ESSN 2055-0278
PubMed: 31182847
DOI: 10.1038/S41477-019-0438-4
Page generated: Tue Oct 1 05:43:36 2024
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