Magnesium in PDB 6k61: Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120
Enzymatic activity of Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120
All present enzymatic activity of Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120:
1.97.1.12;
Other elements in 6k61:
The structure of Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120 also contains other interesting chemical elements:
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
40;
Page 5, Binding sites: 41 -
50;
Page 6, Binding sites: 51 -
60;
Page 7, Binding sites: 61 -
70;
Page 8, Binding sites: 71 -
80;
Page 9, Binding sites: 81 -
90;
Page 10, Binding sites: 91 -
100;
Page 11, Binding sites: 101 -
110;
Page 12, Binding sites: 111 -
120;
Page 13, Binding sites: 121 -
130;
Page 14, Binding sites: 131 -
140;
Page 15, Binding sites: 141 -
150;
Page 16, Binding sites: 151 -
160;
Page 17, Binding sites: 161 -
170;
Page 18, Binding sites: 171 -
180;
Page 19, Binding sites: 181 -
190;
Binding sites:
The binding sites of Magnesium atom in the Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120
(pdb code 6k61). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 190 binding sites of Magnesium where determined in the
Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120, PDB code: 6k61:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 190 in 6k61
Go back to
Magnesium Binding Sites List in 6k61
Magnesium binding site 1 out
of 190 in the Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg801
b:63.5
occ:1.00
|
MG
|
A:CL0801
|
0.0
|
63.5
|
1.0
|
ND
|
A:CL0801
|
2.1
|
83.3
|
1.0
|
NB
|
A:CL0801
|
2.1
|
71.9
|
1.0
|
NC
|
A:CL0801
|
2.1
|
57.2
|
1.0
|
NA
|
A:CL0801
|
2.3
|
79.2
|
1.0
|
C4D
|
A:CL0801
|
3.0
|
73.1
|
1.0
|
C4B
|
A:CL0801
|
3.0
|
67.9
|
1.0
|
C1B
|
A:CL0801
|
3.1
|
73.2
|
1.0
|
NE2
|
A:HIS677
|
3.1
|
17.9
|
1.0
|
C1C
|
A:CL0801
|
3.1
|
58.8
|
1.0
|
C1D
|
A:CL0801
|
3.2
|
69.2
|
1.0
|
C4A
|
A:CL0801
|
3.2
|
73.2
|
1.0
|
C4C
|
A:CL0801
|
3.2
|
57.4
|
1.0
|
C1A
|
A:CL0801
|
3.3
|
72.7
|
1.0
|
CHC
|
A:CL0801
|
3.4
|
68.0
|
1.0
|
CHB
|
A:CL0801
|
3.4
|
70.0
|
1.0
|
CAB
|
B:CLA805
|
3.5
|
16.5
|
1.0
|
CHA
|
A:CL0801
|
3.6
|
69.3
|
1.0
|
CD2
|
A:HIS677
|
3.6
|
17.9
|
1.0
|
CHD
|
A:CL0801
|
3.6
|
64.5
|
1.0
|
C3B
|
B:CLA805
|
3.8
|
16.5
|
1.0
|
CHC
|
B:CLA805
|
4.0
|
16.5
|
1.0
|
C4B
|
B:CLA805
|
4.0
|
16.5
|
1.0
|
C3D
|
A:CL0801
|
4.2
|
73.8
|
1.0
|
CE1
|
A:HIS677
|
4.3
|
17.9
|
1.0
|
C3B
|
A:CL0801
|
4.3
|
54.6
|
1.0
|
C2B
|
A:CL0801
|
4.4
|
65.9
|
1.0
|
C2D
|
A:CL0801
|
4.4
|
65.4
|
1.0
|
C2C
|
A:CL0801
|
4.4
|
67.9
|
1.0
|
C3C
|
A:CL0801
|
4.5
|
71.8
|
1.0
|
C3A
|
A:CL0801
|
4.5
|
68.8
|
1.0
|
C2A
|
A:CL0801
|
4.6
|
60.3
|
1.0
|
C2B
|
B:CLA805
|
4.6
|
16.5
|
1.0
|
CBB
|
B:CLA805
|
4.6
|
16.5
|
1.0
|
C1C
|
B:CLA805
|
4.8
|
16.5
|
1.0
|
NB
|
B:CLA805
|
4.9
|
16.5
|
1.0
|
CG
|
A:HIS677
|
4.9
|
17.9
|
1.0
|
CZ
|
B:PHE627
|
4.9
|
22.5
|
1.0
|
|
Magnesium binding site 2 out
of 190 in 6k61
Go back to
Magnesium Binding Sites List in 6k61
Magnesium binding site 2 out
of 190 in the Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg802
b:13.7
occ:1.00
|
MG
|
A:CLA802
|
0.0
|
13.7
|
1.0
|
NB
|
A:CLA802
|
2.0
|
13.7
|
1.0
|
ND
|
A:CLA802
|
2.0
|
13.7
|
1.0
|
NC
|
A:CLA802
|
2.1
|
13.7
|
1.0
|
NA
|
A:CLA802
|
2.1
|
13.7
|
1.0
|
C4D
|
A:CLA802
|
2.9
|
13.7
|
1.0
|
C1B
|
A:CLA802
|
2.9
|
13.7
|
1.0
|
C4B
|
A:CLA802
|
3.0
|
13.7
|
1.0
|
C4A
|
A:CLA802
|
3.0
|
13.7
|
1.0
|
C1C
|
A:CLA802
|
3.1
|
13.7
|
1.0
|
C1D
|
A:CLA802
|
3.1
|
13.7
|
1.0
|
C4C
|
A:CLA802
|
3.1
|
13.7
|
1.0
|
C1A
|
A:CLA802
|
3.2
|
13.7
|
1.0
|
CBB
|
B:CLA806
|
3.3
|
13.7
|
1.0
|
CHB
|
A:CLA802
|
3.3
|
13.7
|
1.0
|
CHC
|
A:CLA802
|
3.4
|
13.7
|
1.0
|
CHA
|
A:CLA802
|
3.5
|
13.7
|
1.0
|
CHD
|
A:CLA802
|
3.5
|
13.7
|
1.0
|
CAB
|
B:CLA806
|
3.9
|
13.7
|
1.0
|
C2B
|
A:CLA802
|
4.2
|
13.7
|
1.0
|
C3B
|
A:CLA802
|
4.2
|
13.7
|
1.0
|
C3D
|
A:CLA802
|
4.2
|
13.7
|
1.0
|
C2C
|
A:CLA802
|
4.3
|
13.7
|
1.0
|
C2D
|
A:CLA802
|
4.3
|
13.7
|
1.0
|
C3C
|
A:CLA802
|
4.4
|
13.7
|
1.0
|
C3A
|
A:CLA802
|
4.4
|
13.7
|
1.0
|
C2A
|
A:CLA802
|
4.5
|
13.7
|
1.0
|
CB
|
B:ALA665
|
4.6
|
12.4
|
1.0
|
C20
|
A:CL0801
|
4.7
|
75.6
|
1.0
|
C3B
|
B:CLA806
|
4.7
|
13.7
|
1.0
|
OD1
|
A:ASN601
|
4.8
|
15.4
|
1.0
|
CBD
|
A:CLA802
|
4.9
|
13.7
|
1.0
|
C2
|
A:CL0801
|
4.9
|
55.7
|
1.0
|
|
Magnesium binding site 3 out
of 190 in 6k61
Go back to
Magnesium Binding Sites List in 6k61
Magnesium binding site 3 out
of 190 in the Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg803
b:38.5
occ:1.00
|
MG
|
A:CLA803
|
0.0
|
38.5
|
1.0
|
NB
|
A:CLA803
|
2.0
|
38.5
|
1.0
|
ND
|
A:CLA803
|
2.0
|
38.5
|
1.0
|
NC
|
A:CLA803
|
2.1
|
38.5
|
1.0
|
NA
|
A:CLA803
|
2.1
|
38.5
|
1.0
|
C4D
|
A:CLA803
|
2.9
|
38.5
|
1.0
|
C1B
|
A:CLA803
|
3.0
|
38.5
|
1.0
|
NE2
|
A:HIS53
|
3.0
|
33.4
|
1.0
|
C4A
|
A:CLA803
|
3.0
|
38.5
|
1.0
|
C4B
|
A:CLA803
|
3.0
|
38.5
|
1.0
|
C1C
|
A:CLA803
|
3.1
|
38.5
|
1.0
|
C4C
|
A:CLA803
|
3.1
|
38.5
|
1.0
|
C1A
|
A:CLA803
|
3.1
|
38.5
|
1.0
|
C1D
|
A:CLA803
|
3.1
|
38.5
|
1.0
|
CHB
|
A:CLA803
|
3.4
|
38.5
|
1.0
|
CG
|
J:PRO19
|
3.4
|
42.8
|
1.0
|
CHC
|
A:CLA803
|
3.4
|
38.5
|
1.0
|
CHA
|
A:CLA803
|
3.5
|
38.5
|
1.0
|
CHD
|
A:CLA803
|
3.5
|
38.5
|
1.0
|
CB
|
J:PRO19
|
3.6
|
42.8
|
1.0
|
CE1
|
A:HIS53
|
3.8
|
33.4
|
1.0
|
CD2
|
A:HIS53
|
4.1
|
33.4
|
1.0
|
C3D
|
A:CLA803
|
4.2
|
38.5
|
1.0
|
CD
|
J:PRO19
|
4.2
|
42.8
|
1.0
|
C2B
|
A:CLA803
|
4.3
|
38.5
|
1.0
|
C3B
|
A:CLA803
|
4.3
|
38.5
|
1.0
|
C2C
|
A:CLA803
|
4.3
|
38.5
|
1.0
|
C2D
|
A:CLA803
|
4.3
|
38.5
|
1.0
|
C3C
|
A:CLA803
|
4.4
|
38.5
|
1.0
|
C3A
|
A:CLA803
|
4.4
|
38.5
|
1.0
|
C2A
|
A:CLA803
|
4.4
|
38.5
|
1.0
|
C39
|
J:BCR104
|
4.8
|
43.1
|
1.0
|
CD2
|
A:LEU52
|
4.9
|
35.3
|
1.0
|
CBD
|
A:CLA803
|
4.9
|
38.5
|
1.0
|
CA
|
J:PRO19
|
5.0
|
42.8
|
1.0
|
ND1
|
A:HIS53
|
5.0
|
33.4
|
1.0
|
|
Magnesium binding site 4 out
of 190 in 6k61
Go back to
Magnesium Binding Sites List in 6k61
Magnesium binding site 4 out
of 190 in the Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg804
b:38.4
occ:1.00
|
MG
|
A:CLA804
|
0.0
|
38.4
|
1.0
|
NB
|
A:CLA804
|
2.0
|
38.4
|
1.0
|
ND
|
A:CLA804
|
2.0
|
38.4
|
1.0
|
NC
|
A:CLA804
|
2.1
|
38.4
|
1.0
|
NA
|
A:CLA804
|
2.1
|
38.4
|
1.0
|
C4D
|
A:CLA804
|
2.9
|
38.4
|
1.0
|
C1B
|
A:CLA804
|
3.0
|
38.4
|
1.0
|
NE2
|
A:HIS57
|
3.0
|
33.1
|
1.0
|
C4A
|
A:CLA804
|
3.0
|
38.4
|
1.0
|
C4B
|
A:CLA804
|
3.0
|
38.4
|
1.0
|
C1C
|
A:CLA804
|
3.1
|
38.4
|
1.0
|
C4C
|
A:CLA804
|
3.1
|
38.4
|
1.0
|
C1D
|
A:CLA804
|
3.1
|
38.4
|
1.0
|
C1A
|
A:CLA804
|
3.2
|
38.4
|
1.0
|
CHB
|
A:CLA804
|
3.4
|
38.4
|
1.0
|
CHC
|
A:CLA804
|
3.4
|
38.4
|
1.0
|
CHA
|
A:CLA804
|
3.5
|
38.4
|
1.0
|
CHD
|
A:CLA804
|
3.5
|
38.4
|
1.0
|
C7
|
A:CLA811
|
3.7
|
41.9
|
1.0
|
CE1
|
A:HIS57
|
3.8
|
33.1
|
1.0
|
CD2
|
A:HIS57
|
4.1
|
33.1
|
1.0
|
C3D
|
A:CLA804
|
4.2
|
38.4
|
1.0
|
C2B
|
A:CLA804
|
4.3
|
38.4
|
1.0
|
C3B
|
A:CLA804
|
4.3
|
38.4
|
1.0
|
C2C
|
A:CLA804
|
4.3
|
38.4
|
1.0
|
C2D
|
A:CLA804
|
4.3
|
38.4
|
1.0
|
C3C
|
A:CLA804
|
4.4
|
38.4
|
1.0
|
C3A
|
A:CLA804
|
4.4
|
38.4
|
1.0
|
C2A
|
A:CLA804
|
4.5
|
38.4
|
1.0
|
C5
|
A:CLA811
|
4.5
|
41.9
|
1.0
|
C8
|
A:CLA811
|
4.6
|
41.9
|
1.0
|
C10
|
A:CLA811
|
4.6
|
41.9
|
1.0
|
C6
|
A:CLA811
|
4.8
|
41.9
|
1.0
|
C9
|
A:CLA811
|
4.8
|
41.9
|
1.0
|
CBD
|
A:CLA804
|
4.9
|
38.4
|
1.0
|
ND1
|
A:HIS57
|
5.0
|
33.1
|
1.0
|
|
Magnesium binding site 5 out
of 190 in 6k61
Go back to
Magnesium Binding Sites List in 6k61
Magnesium binding site 5 out
of 190 in the Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg805
b:33.3
occ:1.00
|
MG
|
A:CLA805
|
0.0
|
33.3
|
1.0
|
NB
|
A:CLA805
|
2.0
|
33.3
|
1.0
|
ND
|
A:CLA805
|
2.0
|
33.3
|
1.0
|
NC
|
A:CLA805
|
2.1
|
33.3
|
1.0
|
NA
|
A:CLA805
|
2.1
|
33.3
|
1.0
|
C4D
|
A:CLA805
|
2.9
|
33.3
|
1.0
|
NE2
|
A:HIS77
|
3.0
|
35.6
|
1.0
|
C1B
|
A:CLA805
|
3.0
|
33.3
|
1.0
|
C4A
|
A:CLA805
|
3.0
|
33.3
|
1.0
|
C1C
|
A:CLA805
|
3.0
|
33.3
|
1.0
|
C4B
|
A:CLA805
|
3.1
|
33.3
|
1.0
|
C4C
|
A:CLA805
|
3.1
|
33.3
|
1.0
|
C1A
|
A:CLA805
|
3.1
|
33.3
|
1.0
|
C1D
|
A:CLA805
|
3.1
|
33.3
|
1.0
|
CMB
|
A:CLA830
|
3.3
|
27.8
|
1.0
|
CHB
|
A:CLA805
|
3.4
|
33.3
|
1.0
|
CHC
|
A:CLA805
|
3.4
|
33.3
|
1.0
|
CHA
|
A:CLA805
|
3.5
|
33.3
|
1.0
|
CD2
|
A:HIS77
|
3.5
|
35.6
|
1.0
|
CHD
|
A:CLA805
|
3.5
|
33.3
|
1.0
|
CE1
|
A:HIS77
|
4.1
|
35.6
|
1.0
|
C3D
|
A:CLA805
|
4.3
|
33.3
|
1.0
|
C2C
|
A:CLA805
|
4.3
|
33.3
|
1.0
|
C2B
|
A:CLA805
|
4.3
|
33.3
|
1.0
|
C3B
|
A:CLA805
|
4.3
|
33.3
|
1.0
|
C3C
|
A:CLA805
|
4.3
|
33.3
|
1.0
|
C2D
|
A:CLA805
|
4.3
|
33.3
|
1.0
|
C3A
|
A:CLA805
|
4.4
|
33.3
|
1.0
|
C2A
|
A:CLA805
|
4.4
|
33.3
|
1.0
|
C2B
|
A:CLA830
|
4.7
|
27.8
|
1.0
|
CG2
|
A:ILE73
|
4.7
|
36.7
|
1.0
|
CG
|
A:HIS77
|
4.8
|
35.6
|
1.0
|
CBB
|
A:CLA830
|
4.9
|
27.8
|
1.0
|
CBD
|
A:CLA805
|
4.9
|
33.3
|
1.0
|
|
Magnesium binding site 6 out
of 190 in 6k61
Go back to
Magnesium Binding Sites List in 6k61
Magnesium binding site 6 out
of 190 in the Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg806
b:29.3
occ:1.00
|
MG
|
A:CLA806
|
0.0
|
29.3
|
1.0
|
NB
|
A:CLA806
|
2.0
|
29.3
|
1.0
|
ND
|
A:CLA806
|
2.0
|
29.3
|
1.0
|
NA
|
A:CLA806
|
2.1
|
29.3
|
1.0
|
NC
|
A:CLA806
|
2.1
|
29.3
|
1.0
|
C4D
|
A:CLA806
|
2.9
|
29.3
|
1.0
|
NE2
|
A:HIS80
|
3.0
|
33.8
|
1.0
|
C1B
|
A:CLA806
|
3.0
|
29.3
|
1.0
|
C4A
|
A:CLA806
|
3.0
|
29.3
|
1.0
|
C4B
|
A:CLA806
|
3.1
|
29.3
|
1.0
|
C1C
|
A:CLA806
|
3.1
|
29.3
|
1.0
|
C4C
|
A:CLA806
|
3.1
|
29.3
|
1.0
|
C1D
|
A:CLA806
|
3.1
|
29.3
|
1.0
|
C1A
|
A:CLA806
|
3.1
|
29.3
|
1.0
|
CHB
|
A:CLA806
|
3.4
|
29.3
|
1.0
|
C16
|
A:CLA806
|
3.4
|
29.3
|
1.0
|
CHC
|
A:CLA806
|
3.4
|
29.3
|
1.0
|
CHA
|
A:CLA806
|
3.5
|
29.3
|
1.0
|
C17
|
A:CLA806
|
3.5
|
29.3
|
1.0
|
CHD
|
A:CLA806
|
3.5
|
29.3
|
1.0
|
CD2
|
A:HIS80
|
3.8
|
33.8
|
1.0
|
CE1
|
A:HIS80
|
4.0
|
33.8
|
1.0
|
C3D
|
A:CLA806
|
4.2
|
29.3
|
1.0
|
C2B
|
A:CLA806
|
4.3
|
29.3
|
1.0
|
C18
|
A:CLA806
|
4.3
|
29.3
|
1.0
|
C3B
|
A:CLA806
|
4.3
|
29.3
|
1.0
|
C2C
|
A:CLA806
|
4.3
|
29.3
|
1.0
|
C2D
|
A:CLA806
|
4.3
|
29.3
|
1.0
|
C3C
|
A:CLA806
|
4.3
|
29.3
|
1.0
|
C3A
|
A:CLA806
|
4.4
|
29.3
|
1.0
|
C2A
|
A:CLA806
|
4.4
|
29.3
|
1.0
|
C15
|
A:CLA806
|
4.6
|
29.3
|
1.0
|
C19
|
A:CLA806
|
4.8
|
29.3
|
1.0
|
C14
|
A:CLA806
|
4.9
|
29.3
|
1.0
|
CBD
|
A:CLA806
|
4.9
|
29.3
|
1.0
|
|
Magnesium binding site 7 out
of 190 in 6k61
Go back to
Magnesium Binding Sites List in 6k61
Magnesium binding site 7 out
of 190 in the Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg807
b:42.7
occ:1.00
|
MG
|
A:CLA807
|
0.0
|
42.7
|
1.0
|
NB
|
A:CLA807
|
2.0
|
42.7
|
1.0
|
ND
|
A:CLA807
|
2.0
|
42.7
|
1.0
|
NC
|
A:CLA807
|
2.1
|
42.7
|
1.0
|
NA
|
A:CLA807
|
2.1
|
42.7
|
1.0
|
C4D
|
A:CLA807
|
2.9
|
42.7
|
1.0
|
C1B
|
A:CLA807
|
3.0
|
42.7
|
1.0
|
NE2
|
A:HIS94
|
3.0
|
42.9
|
1.0
|
C4A
|
A:CLA807
|
3.0
|
42.7
|
1.0
|
C4B
|
A:CLA807
|
3.1
|
42.7
|
1.0
|
C1C
|
A:CLA807
|
3.1
|
42.7
|
1.0
|
C4C
|
A:CLA807
|
3.1
|
42.7
|
1.0
|
C1D
|
A:CLA807
|
3.1
|
42.7
|
1.0
|
C1A
|
A:CLA807
|
3.2
|
42.7
|
1.0
|
CHB
|
A:CLA807
|
3.4
|
42.7
|
1.0
|
CHC
|
A:CLA807
|
3.4
|
42.7
|
1.0
|
CHA
|
A:CLA807
|
3.5
|
42.7
|
1.0
|
CHD
|
A:CLA807
|
3.5
|
42.7
|
1.0
|
CE1
|
A:HIS94
|
3.7
|
42.9
|
1.0
|
CD2
|
A:HIS94
|
4.1
|
42.9
|
1.0
|
C3D
|
A:CLA807
|
4.2
|
42.7
|
1.0
|
C2B
|
A:CLA807
|
4.3
|
42.7
|
1.0
|
C3B
|
A:CLA807
|
4.3
|
42.7
|
1.0
|
C2C
|
A:CLA807
|
4.3
|
42.7
|
1.0
|
C2D
|
A:CLA807
|
4.3
|
42.7
|
1.0
|
C3C
|
A:CLA807
|
4.3
|
42.7
|
1.0
|
C3A
|
A:CLA807
|
4.4
|
42.7
|
1.0
|
C2A
|
A:CLA807
|
4.5
|
42.7
|
1.0
|
ND1
|
A:HIS94
|
4.9
|
42.9
|
1.0
|
CBD
|
A:CLA807
|
4.9
|
42.7
|
1.0
|
CBA
|
A:CLA807
|
5.0
|
42.7
|
1.0
|
|
Magnesium binding site 8 out
of 190 in 6k61
Go back to
Magnesium Binding Sites List in 6k61
Magnesium binding site 8 out
of 190 in the Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg808
b:33.6
occ:1.00
|
MG
|
A:CLA808
|
0.0
|
33.6
|
1.0
|
NB
|
A:CLA808
|
2.0
|
33.6
|
1.0
|
ND
|
A:CLA808
|
2.0
|
33.6
|
1.0
|
NA
|
A:CLA808
|
2.1
|
33.6
|
1.0
|
NC
|
A:CLA808
|
2.1
|
33.6
|
1.0
|
C4D
|
A:CLA808
|
2.9
|
33.6
|
1.0
|
OE1
|
A:GLN116
|
3.0
|
39.3
|
1.0
|
C1B
|
A:CLA808
|
3.0
|
33.6
|
1.0
|
C4A
|
A:CLA808
|
3.0
|
33.6
|
1.0
|
C4B
|
A:CLA808
|
3.0
|
33.6
|
1.0
|
C1C
|
A:CLA808
|
3.1
|
33.6
|
1.0
|
C1D
|
A:CLA808
|
3.1
|
33.6
|
1.0
|
C4C
|
A:CLA808
|
3.1
|
33.6
|
1.0
|
C1A
|
A:CLA808
|
3.1
|
33.6
|
1.0
|
NE2
|
A:GLN116
|
3.3
|
39.3
|
1.0
|
CHB
|
A:CLA808
|
3.4
|
33.6
|
1.0
|
CHC
|
A:CLA808
|
3.4
|
33.6
|
1.0
|
CD
|
A:GLN116
|
3.4
|
39.3
|
1.0
|
CHA
|
A:CLA808
|
3.5
|
33.6
|
1.0
|
C4
|
A:CLA828
|
3.5
|
28.0
|
1.0
|
CHD
|
A:CLA808
|
3.5
|
33.6
|
1.0
|
C3D
|
A:CLA808
|
4.2
|
33.6
|
1.0
|
C2B
|
A:CLA808
|
4.3
|
33.6
|
1.0
|
C3B
|
A:CLA808
|
4.3
|
33.6
|
1.0
|
C2C
|
A:CLA808
|
4.3
|
33.6
|
1.0
|
C2D
|
A:CLA808
|
4.3
|
33.6
|
1.0
|
C3C
|
A:CLA808
|
4.4
|
33.6
|
1.0
|
C3A
|
A:CLA808
|
4.4
|
33.6
|
1.0
|
C2A
|
A:CLA808
|
4.4
|
33.6
|
1.0
|
O1A
|
A:CLA808
|
4.5
|
33.6
|
1.0
|
C6
|
A:CLA828
|
4.5
|
28.0
|
1.0
|
C7
|
A:CLA828
|
4.6
|
28.0
|
1.0
|
CG
|
A:GLN116
|
4.8
|
39.3
|
1.0
|
C3
|
A:CLA828
|
4.8
|
28.0
|
1.0
|
CBD
|
A:CLA808
|
4.9
|
33.6
|
1.0
|
|
Magnesium binding site 9 out
of 190 in 6k61
Go back to
Magnesium Binding Sites List in 6k61
Magnesium binding site 9 out
of 190 in the Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg809
b:38.9
occ:1.00
|
MG
|
A:CLA809
|
0.0
|
38.9
|
1.0
|
NB
|
A:CLA809
|
2.0
|
38.9
|
1.0
|
ND
|
A:CLA809
|
2.0
|
38.9
|
1.0
|
NC
|
A:CLA809
|
2.1
|
38.9
|
1.0
|
NA
|
A:CLA809
|
2.1
|
38.9
|
1.0
|
OE1
|
A:GLN124
|
2.9
|
40.9
|
1.0
|
C4D
|
A:CLA809
|
2.9
|
38.9
|
1.0
|
C1B
|
A:CLA809
|
3.0
|
38.9
|
1.0
|
C4A
|
A:CLA809
|
3.0
|
38.9
|
1.0
|
C4B
|
A:CLA809
|
3.0
|
38.9
|
1.0
|
C1C
|
A:CLA809
|
3.1
|
38.9
|
1.0
|
C1D
|
A:CLA809
|
3.1
|
38.9
|
1.0
|
C4C
|
A:CLA809
|
3.1
|
38.9
|
1.0
|
C1A
|
A:CLA809
|
3.2
|
38.9
|
1.0
|
CHB
|
A:CLA809
|
3.4
|
38.9
|
1.0
|
CHC
|
A:CLA809
|
3.4
|
38.9
|
1.0
|
CHA
|
A:CLA809
|
3.5
|
38.9
|
1.0
|
CHD
|
A:CLA809
|
3.5
|
38.9
|
1.0
|
C19
|
A:CLA828
|
3.5
|
28.0
|
1.0
|
C18
|
A:CLA828
|
3.6
|
28.0
|
1.0
|
CD
|
A:GLN124
|
4.1
|
40.9
|
1.0
|
C3D
|
A:CLA809
|
4.2
|
38.9
|
1.0
|
C2B
|
A:CLA809
|
4.3
|
38.9
|
1.0
|
C3B
|
A:CLA809
|
4.3
|
38.9
|
1.0
|
C2C
|
A:CLA809
|
4.3
|
38.9
|
1.0
|
C2D
|
A:CLA809
|
4.3
|
38.9
|
1.0
|
C20
|
A:CLA828
|
4.3
|
28.0
|
1.0
|
C3C
|
A:CLA809
|
4.4
|
38.9
|
1.0
|
C3A
|
A:CLA809
|
4.4
|
38.9
|
1.0
|
C2A
|
A:CLA809
|
4.5
|
38.9
|
1.0
|
NE2
|
A:GLN124
|
4.7
|
40.9
|
1.0
|
C17
|
A:CLA828
|
4.8
|
28.0
|
1.0
|
CBD
|
A:CLA809
|
4.9
|
38.9
|
1.0
|
C16
|
A:CLA828
|
5.0
|
28.0
|
1.0
|
|
Magnesium binding site 10 out
of 190 in 6k61
Go back to
Magnesium Binding Sites List in 6k61
Magnesium binding site 10 out
of 190 in the Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Cryo-Em Structure of the Tetrameric Photosystem I From A Heterocyst- Forming Cyanobacterium Anabaena Sp. PCC7120 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg810
b:45.1
occ:1.00
|
MG
|
A:CLA810
|
0.0
|
45.1
|
1.0
|
NB
|
A:CLA810
|
2.0
|
45.1
|
1.0
|
ND
|
A:CLA810
|
2.0
|
45.1
|
1.0
|
NC
|
A:CLA810
|
2.1
|
45.1
|
1.0
|
NA
|
A:CLA810
|
2.1
|
45.1
|
1.0
|
C4D
|
A:CLA810
|
2.9
|
45.1
|
1.0
|
NE2
|
A:HIS180
|
3.0
|
43.9
|
1.0
|
C1B
|
A:CLA810
|
3.0
|
45.1
|
1.0
|
C4A
|
A:CLA810
|
3.0
|
45.1
|
1.0
|
C4B
|
A:CLA810
|
3.1
|
45.1
|
1.0
|
C1C
|
A:CLA810
|
3.1
|
45.1
|
1.0
|
C4C
|
A:CLA810
|
3.1
|
45.1
|
1.0
|
C1D
|
A:CLA810
|
3.1
|
45.1
|
1.0
|
C1A
|
A:CLA810
|
3.2
|
45.1
|
1.0
|
CHB
|
A:CLA810
|
3.4
|
45.1
|
1.0
|
CE1
|
A:HIS180
|
3.4
|
43.9
|
1.0
|
CHC
|
A:CLA810
|
3.4
|
45.1
|
1.0
|
CHA
|
A:CLA810
|
3.5
|
45.1
|
1.0
|
CHD
|
A:CLA810
|
3.5
|
45.1
|
1.0
|
C3D
|
A:CLA810
|
4.2
|
45.1
|
1.0
|
CD2
|
A:HIS180
|
4.3
|
43.9
|
1.0
|
C2B
|
A:CLA810
|
4.3
|
45.1
|
1.0
|
C3B
|
A:CLA810
|
4.3
|
45.1
|
1.0
|
C2C
|
A:CLA810
|
4.3
|
45.1
|
1.0
|
C2D
|
A:CLA810
|
4.3
|
45.1
|
1.0
|
C3C
|
A:CLA810
|
4.4
|
45.1
|
1.0
|
C3A
|
A:CLA810
|
4.4
|
45.1
|
1.0
|
C2A
|
A:CLA810
|
4.5
|
45.1
|
1.0
|
ND1
|
A:HIS180
|
4.7
|
43.9
|
1.0
|
CBD
|
A:CLA810
|
4.9
|
45.1
|
1.0
|
|
Reference:
L.Zheng,
Y.Li,
X.Li,
Q.Zhong,
N.Li,
K.Zhang,
Y.Zhang,
H.Chu,
C.Ma,
G.Li,
J.Zhao,
N.Gao.
Structural and Functional Insights Into the Tetrameric Photosystem I From Heterocyst-Forming Cyanobacteria. Nat.Plants V. 5 1087 2019.
ISSN: ESSN 2055-0278
PubMed: 31595062
DOI: 10.1038/S41477-019-0525-6
Page generated: Tue Oct 1 06:25:41 2024
|