Magnesium in PDB 6k82: RGLG1 Mutant-D338A E378A

Enzymatic activity of RGLG1 Mutant-D338A E378A

All present enzymatic activity of RGLG1 Mutant-D338A E378A:
2.3.2.27;

Protein crystallography data

The structure of RGLG1 Mutant-D338A E378A, PDB code: 6k82 was solved by Q.Wang, Y.Wu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.14 / 1.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 44.454, 73.327, 82.280, 90.00, 90.00, 90.00
R / Rfree (%) 19.5 / 22.1

Other elements in 6k82:

The structure of RGLG1 Mutant-D338A E378A also contains other interesting chemical elements:

Sodium (Na) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the RGLG1 Mutant-D338A E378A (pdb code 6k82). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the RGLG1 Mutant-D338A E378A, PDB code: 6k82:

Magnesium binding site 1 out of 1 in 6k82

Go back to Magnesium Binding Sites List in 6k82
Magnesium binding site 1 out of 1 in the RGLG1 Mutant-D338A E378A


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of RGLG1 Mutant-D338A E378A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg501

b:19.1
occ:1.00
O B:HOH756 2.1 19.8 1.0
OD1 B:ASP286 2.1 18.3 1.0
O B:HOH643 2.1 17.4 1.0
OG B:SER166 2.1 18.8 1.0
O B:HOH779 2.1 20.0 1.0
OG1 B:THR164 2.2 17.6 1.0
CG B:ASP286 3.1 20.4 1.0
CB B:THR164 3.2 18.1 1.0
CB B:SER166 3.3 19.5 1.0
OD2 B:ASP286 3.4 21.3 1.0
CG2 B:THR164 3.9 18.2 1.0
OD2 B:ASP162 3.9 16.9 1.0
OG1 B:THR258 4.0 19.4 1.0
OD1 B:ASP162 4.0 16.9 1.0
N B:GLY287 4.2 17.4 1.0
C B:ASP286 4.3 18.3 1.0
O B:HOH703 4.3 18.8 1.0
O B:HOH833 4.3 34.3 1.0
CA B:SER166 4.4 18.9 1.0
CG B:ASP162 4.4 16.6 1.0
O B:ASP286 4.4 20.0 1.0
CB B:ASP286 4.4 18.1 1.0
O B:HOH642 4.5 27.3 1.0
N B:SER166 4.5 19.2 1.0
O B:HOH721 4.5 19.0 1.0
CA B:THR164 4.5 16.9 1.0
CA B:GLY287 4.6 20.3 1.0
CA B:ASP286 4.7 18.2 1.0
N B:ASN167 4.8 19.8 1.0
C B:THR164 4.8 20.0 1.0
C B:SER166 4.8 21.7 1.0
ND2 B:ASN167 4.9 17.4 1.0
N B:ASP286 4.9 16.4 1.0
O B:THR164 5.0 18.8 1.0

Reference:

Q.Wang, Y.Wu. RGLG1 Mutant-D338A E378A To Be Published.
Page generated: Mon Dec 14 23:04:39 2020

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