Magnesium in PDB 6k86: The Closed State of RGLG1 Mutant-E378A

Enzymatic activity of The Closed State of RGLG1 Mutant-E378A

All present enzymatic activity of The Closed State of RGLG1 Mutant-E378A:
2.3.2.27;

Protein crystallography data

The structure of The Closed State of RGLG1 Mutant-E378A, PDB code: 6k86 was solved by Q.Wang, Y.Wu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.39 / 1.59
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 45.589, 72.555, 80.848, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 23.3

Other elements in 6k86:

The structure of The Closed State of RGLG1 Mutant-E378A also contains other interesting chemical elements:

Sodium (Na) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Closed State of RGLG1 Mutant-E378A (pdb code 6k86). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Closed State of RGLG1 Mutant-E378A, PDB code: 6k86:

Magnesium binding site 1 out of 1 in 6k86

Go back to Magnesium Binding Sites List in 6k86
Magnesium binding site 1 out of 1 in the The Closed State of RGLG1 Mutant-E378A


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Closed State of RGLG1 Mutant-E378A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg501

b:40.2
occ:1.00
OG B:SER166 2.0 37.1 1.0
O B:HOH671 2.1 37.0 1.0
OD1 B:ASP286 2.1 35.0 1.0
O B:HOH638 2.1 35.1 1.0
OG1 B:THR164 2.2 31.7 1.0
O B:HOH714 2.5 40.2 1.0
CG B:ASP286 3.1 35.5 1.0
CB B:SER166 3.3 38.7 1.0
CB B:THR164 3.4 31.7 1.0
OD2 B:ASP286 3.4 34.7 1.0
OD2 B:ASP162 3.8 33.2 1.0
OG1 B:THR258 3.9 30.3 1.0
OD1 B:ASP162 4.0 30.0 1.0
CG2 B:THR164 4.0 29.0 1.0
N B:GLY287 4.2 30.8 1.0
C B:ASP286 4.2 33.2 1.0
CA B:SER166 4.3 35.0 1.0
CG B:ASP162 4.4 29.5 1.0
O B:ASP286 4.4 33.1 1.0
CB B:ASP286 4.4 34.5 1.0
N B:SER166 4.4 33.5 1.0
CA B:GLY287 4.5 34.6 1.0
CA B:THR164 4.6 28.7 1.0
O B:HOH653 4.6 37.8 1.0
N B:ASN167 4.6 33.1 1.0
O B:HOH704 4.7 39.2 1.0
CA B:ASP286 4.7 32.8 1.0
C B:SER166 4.7 36.4 1.0
ND2 B:ASN167 4.7 30.8 1.0
O B:HOH677 4.8 35.5 1.0
N B:ASP286 4.8 30.0 1.0
C B:THR164 4.8 32.8 1.0
O B:THR164 4.9 29.6 1.0

Reference:

Q.Wang, Y.Wu. The Closed State of RGLG1 Mutant-E378A To Be Published.
Page generated: Mon Dec 14 23:04:43 2020

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