Magnesium in PDB 6kac: Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii
Enzymatic activity of Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii
All present enzymatic activity of Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii:
1.10.3.9;
Other elements in 6kac:
The structure of Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii also contains other interesting chemical elements:
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
40;
Page 5, Binding sites: 41 -
50;
Page 6, Binding sites: 51 -
60;
Page 7, Binding sites: 61 -
70;
Page 8, Binding sites: 71 -
80;
Page 9, Binding sites: 81 -
90;
Page 10, Binding sites: 91 -
100;
Page 11, Binding sites: 101 -
110;
Page 12, Binding sites: 111 -
120;
Page 13, Binding sites: 121 -
130;
Page 14, Binding sites: 131 -
140;
Page 15, Binding sites: 141 -
150;
Page 16, Binding sites: 151 -
160;
Page 17, Binding sites: 161 -
170;
Page 18, Binding sites: 171 -
180;
Page 19, Binding sites: 181 -
190;
Page 20, Binding sites: 191 -
198;
Binding sites:
The binding sites of Magnesium atom in the Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii
(pdb code 6kac). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 198 binding sites of Magnesium where determined in the
Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii, PDB code: 6kac:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 198 in 6kac
Go back to
Magnesium Binding Sites List in 6kac
Magnesium binding site 1 out
of 198 in the Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg405
b:43.2
occ:1.00
|
MG
|
A:CLA405
|
0.0
|
43.2
|
1.0
|
NB
|
A:CLA405
|
2.0
|
43.2
|
1.0
|
ND
|
A:CLA405
|
2.0
|
43.2
|
1.0
|
NC
|
A:CLA405
|
2.1
|
43.2
|
1.0
|
NA
|
A:CLA405
|
2.1
|
43.2
|
1.0
|
NE2
|
A:HIS198
|
2.2
|
26.4
|
1.0
|
C4D
|
A:CLA405
|
2.9
|
43.2
|
1.0
|
CE1
|
A:HIS198
|
3.0
|
26.4
|
1.0
|
C1B
|
A:CLA405
|
3.0
|
43.2
|
1.0
|
C1C
|
A:CLA405
|
3.0
|
43.2
|
1.0
|
C4A
|
A:CLA405
|
3.1
|
43.2
|
1.0
|
C4B
|
A:CLA405
|
3.1
|
43.2
|
1.0
|
C1A
|
A:CLA405
|
3.1
|
43.2
|
1.0
|
C4C
|
A:CLA405
|
3.2
|
43.2
|
1.0
|
C1D
|
A:CLA405
|
3.2
|
43.2
|
1.0
|
CD2
|
A:HIS198
|
3.3
|
26.4
|
1.0
|
CHB
|
A:CLA405
|
3.4
|
43.2
|
1.0
|
CHC
|
A:CLA405
|
3.4
|
43.2
|
1.0
|
CHA
|
A:CLA405
|
3.4
|
43.2
|
1.0
|
CHD
|
A:CLA405
|
3.6
|
43.2
|
1.0
|
CBB
|
D:CLA402
|
3.7
|
43.2
|
1.0
|
ND1
|
A:HIS198
|
4.2
|
26.4
|
1.0
|
CE
|
A:MET183
|
4.2
|
26.7
|
1.0
|
C3D
|
A:CLA405
|
4.2
|
43.2
|
1.0
|
C2C
|
A:CLA405
|
4.3
|
43.2
|
1.0
|
C2B
|
A:CLA405
|
4.3
|
43.2
|
1.0
|
C3B
|
A:CLA405
|
4.3
|
43.2
|
1.0
|
C2D
|
A:CLA405
|
4.3
|
43.2
|
1.0
|
CG
|
A:HIS198
|
4.4
|
26.4
|
1.0
|
C3C
|
A:CLA405
|
4.4
|
43.2
|
1.0
|
C3A
|
A:CLA405
|
4.4
|
43.2
|
1.0
|
C2A
|
A:CLA405
|
4.4
|
43.2
|
1.0
|
CAB
|
D:CLA402
|
4.8
|
43.2
|
1.0
|
CBD
|
A:CLA405
|
4.9
|
43.2
|
1.0
|
|
Magnesium binding site 2 out
of 198 in 6kac
Go back to
Magnesium Binding Sites List in 6kac
Magnesium binding site 2 out
of 198 in the Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg406
b:43.2
occ:1.00
|
MG
|
A:CLA406
|
0.0
|
43.2
|
1.0
|
NB
|
A:CLA406
|
2.0
|
43.2
|
1.0
|
ND
|
A:CLA406
|
2.0
|
43.2
|
1.0
|
NC
|
A:CLA406
|
2.1
|
43.2
|
1.0
|
NA
|
A:CLA406
|
2.1
|
43.2
|
1.0
|
O
|
A:HOH1001
|
2.2
|
38.6
|
1.0
|
C4D
|
A:CLA406
|
2.9
|
43.2
|
1.0
|
C1B
|
A:CLA406
|
3.0
|
43.2
|
1.0
|
C4B
|
A:CLA406
|
3.0
|
43.2
|
1.0
|
C4A
|
A:CLA406
|
3.0
|
43.2
|
1.0
|
C1C
|
A:CLA406
|
3.1
|
43.2
|
1.0
|
C4C
|
A:CLA406
|
3.1
|
43.2
|
1.0
|
C1A
|
A:CLA406
|
3.1
|
43.2
|
1.0
|
C1D
|
A:CLA406
|
3.2
|
43.2
|
1.0
|
CHA
|
A:CLA406
|
3.4
|
43.2
|
1.0
|
CHB
|
A:CLA406
|
3.4
|
43.2
|
1.0
|
CHC
|
A:CLA406
|
3.4
|
43.2
|
1.0
|
CHD
|
A:CLA406
|
3.5
|
43.2
|
1.0
|
CBB
|
A:PHO408
|
4.1
|
43.2
|
1.0
|
C3D
|
A:CLA406
|
4.2
|
43.2
|
1.0
|
C2B
|
A:CLA406
|
4.3
|
43.2
|
1.0
|
C3B
|
A:CLA406
|
4.3
|
43.2
|
1.0
|
C2C
|
A:CLA406
|
4.3
|
43.2
|
1.0
|
C3C
|
A:CLA406
|
4.3
|
43.2
|
1.0
|
C2D
|
A:CLA406
|
4.3
|
43.2
|
1.0
|
C3A
|
A:CLA406
|
4.4
|
43.2
|
1.0
|
C2A
|
A:CLA406
|
4.4
|
43.2
|
1.0
|
CG2
|
A:THR179
|
4.6
|
23.1
|
1.0
|
OG1
|
A:THR179
|
4.7
|
23.1
|
1.0
|
C19
|
A:PHO408
|
4.8
|
43.2
|
1.0
|
C20
|
A:PHO408
|
4.8
|
43.2
|
1.0
|
CBD
|
A:CLA406
|
4.9
|
43.2
|
1.0
|
CBA
|
A:CLA406
|
4.9
|
43.2
|
1.0
|
|
Magnesium binding site 3 out
of 198 in 6kac
Go back to
Magnesium Binding Sites List in 6kac
Magnesium binding site 3 out
of 198 in the Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg407
b:43.2
occ:1.00
|
MG
|
A:CLA407
|
0.0
|
43.2
|
1.0
|
NB
|
A:CLA407
|
2.0
|
43.2
|
1.0
|
ND
|
A:CLA407
|
2.0
|
43.2
|
1.0
|
NC
|
A:CLA407
|
2.1
|
43.2
|
1.0
|
NA
|
A:CLA407
|
2.1
|
43.2
|
1.0
|
O
|
A:HOH1002
|
2.2
|
35.8
|
1.0
|
C4D
|
A:CLA407
|
2.9
|
43.2
|
1.0
|
C1B
|
A:CLA407
|
3.0
|
43.2
|
1.0
|
C4B
|
A:CLA407
|
3.0
|
43.2
|
1.0
|
C1C
|
A:CLA407
|
3.1
|
43.2
|
1.0
|
C4A
|
A:CLA407
|
3.1
|
43.2
|
1.0
|
C1A
|
A:CLA407
|
3.1
|
43.2
|
1.0
|
C4C
|
A:CLA407
|
3.2
|
43.2
|
1.0
|
C1D
|
A:CLA407
|
3.2
|
43.2
|
1.0
|
CHC
|
A:CLA407
|
3.4
|
43.2
|
1.0
|
CHB
|
A:CLA407
|
3.4
|
43.2
|
1.0
|
CHA
|
A:CLA407
|
3.5
|
43.2
|
1.0
|
CHD
|
A:CLA407
|
3.6
|
43.2
|
1.0
|
CBB
|
A:PHO409
|
4.1
|
37.4
|
1.0
|
C3D
|
A:CLA407
|
4.2
|
43.2
|
1.0
|
C2B
|
A:CLA407
|
4.2
|
43.2
|
1.0
|
C3B
|
A:CLA407
|
4.3
|
43.2
|
1.0
|
C2C
|
A:CLA407
|
4.3
|
43.2
|
1.0
|
C2D
|
A:CLA407
|
4.4
|
43.2
|
1.0
|
C3C
|
A:CLA407
|
4.4
|
43.2
|
1.0
|
C3A
|
A:CLA407
|
4.4
|
43.2
|
1.0
|
C2A
|
A:CLA407
|
4.4
|
43.2
|
1.0
|
CG2
|
D:ILE178
|
4.6
|
27.1
|
1.0
|
CG1
|
D:ILE178
|
4.7
|
27.1
|
1.0
|
C20
|
A:PHO409
|
4.8
|
37.4
|
1.0
|
CBD
|
A:CLA407
|
4.9
|
43.2
|
1.0
|
CB
|
D:ILE178
|
5.0
|
27.1
|
1.0
|
|
Magnesium binding site 4 out
of 198 in 6kac
Go back to
Magnesium Binding Sites List in 6kac
Magnesium binding site 4 out
of 198 in the Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg410
b:24.4
occ:1.00
|
MG
|
A:CLA410
|
0.0
|
24.4
|
1.0
|
NB
|
A:CLA410
|
2.0
|
24.4
|
1.0
|
ND
|
A:CLA410
|
2.0
|
24.4
|
1.0
|
NA
|
A:CLA410
|
2.1
|
24.4
|
1.0
|
NC
|
A:CLA410
|
2.1
|
24.4
|
1.0
|
NE2
|
A:HIS118
|
2.2
|
21.5
|
1.0
|
C4D
|
A:CLA410
|
2.9
|
24.4
|
1.0
|
C1B
|
A:CLA410
|
3.0
|
24.4
|
1.0
|
C4B
|
A:CLA410
|
3.0
|
24.4
|
1.0
|
C4A
|
A:CLA410
|
3.1
|
24.4
|
1.0
|
C1C
|
A:CLA410
|
3.1
|
24.4
|
1.0
|
CE1
|
A:HIS118
|
3.1
|
21.5
|
1.0
|
C1D
|
A:CLA410
|
3.1
|
24.4
|
1.0
|
C1A
|
A:CLA410
|
3.1
|
24.4
|
1.0
|
C4C
|
A:CLA410
|
3.1
|
24.4
|
1.0
|
CD2
|
A:HIS118
|
3.2
|
21.5
|
1.0
|
CHC
|
A:CLA410
|
3.4
|
24.4
|
1.0
|
CHA
|
A:CLA410
|
3.4
|
24.4
|
1.0
|
CHB
|
A:CLA410
|
3.4
|
24.4
|
1.0
|
CHD
|
A:CLA410
|
3.5
|
24.4
|
1.0
|
CG2
|
I:VAL12
|
4.1
|
25.8
|
1.0
|
C3D
|
A:CLA410
|
4.2
|
24.4
|
1.0
|
ND1
|
A:HIS118
|
4.2
|
21.5
|
1.0
|
C3B
|
A:CLA410
|
4.3
|
24.4
|
1.0
|
C2B
|
A:CLA410
|
4.3
|
24.4
|
1.0
|
CG
|
A:HIS118
|
4.3
|
21.5
|
1.0
|
C2D
|
A:CLA410
|
4.3
|
24.4
|
1.0
|
C2C
|
A:CLA410
|
4.3
|
24.4
|
1.0
|
C3C
|
A:CLA410
|
4.4
|
24.4
|
1.0
|
C3A
|
A:CLA410
|
4.4
|
24.4
|
1.0
|
C2A
|
A:CLA410
|
4.4
|
24.4
|
1.0
|
CG1
|
I:VAL8
|
4.5
|
27.5
|
1.0
|
CBD
|
A:CLA410
|
4.9
|
24.4
|
1.0
|
CG2
|
A:THR43
|
4.9
|
22.7
|
1.0
|
|
Magnesium binding site 5 out
of 198 in 6kac
Go back to
Magnesium Binding Sites List in 6kac
Magnesium binding site 5 out
of 198 in the Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg602
b:49.8
occ:1.00
|
MG
|
B:CLA602
|
0.0
|
49.8
|
1.0
|
NB
|
B:CLA602
|
2.0
|
49.8
|
1.0
|
ND
|
B:CLA602
|
2.0
|
49.8
|
1.0
|
NC
|
B:CLA602
|
2.1
|
49.8
|
1.0
|
NA
|
B:CLA602
|
2.1
|
49.8
|
1.0
|
O
|
B:HOH1001
|
2.3
|
45.7
|
1.0
|
C4D
|
B:CLA602
|
2.9
|
49.8
|
1.0
|
C1B
|
B:CLA602
|
3.0
|
49.8
|
1.0
|
C4B
|
B:CLA602
|
3.0
|
49.8
|
1.0
|
C4A
|
B:CLA602
|
3.0
|
49.8
|
1.0
|
C1C
|
B:CLA602
|
3.1
|
49.8
|
1.0
|
C4C
|
B:CLA602
|
3.1
|
49.8
|
1.0
|
C1A
|
B:CLA602
|
3.1
|
49.8
|
1.0
|
C1D
|
B:CLA602
|
3.1
|
49.8
|
1.0
|
CHB
|
B:CLA602
|
3.4
|
49.8
|
1.0
|
CHC
|
B:CLA602
|
3.4
|
49.8
|
1.0
|
CHA
|
B:CLA602
|
3.5
|
49.8
|
1.0
|
CHD
|
B:CLA602
|
3.5
|
49.8
|
1.0
|
C16
|
B:CLA602
|
3.6
|
49.8
|
1.0
|
O
|
B:TRP185
|
3.8
|
42.8
|
1.0
|
C17
|
B:CLA602
|
3.9
|
49.8
|
1.0
|
CBB
|
B:CLA603
|
4.2
|
38.4
|
1.0
|
C3D
|
B:CLA602
|
4.2
|
49.8
|
1.0
|
C2B
|
B:CLA602
|
4.3
|
49.8
|
1.0
|
C3B
|
B:CLA602
|
4.3
|
49.8
|
1.0
|
C15
|
B:CLA602
|
4.3
|
49.8
|
1.0
|
C2C
|
B:CLA602
|
4.3
|
49.8
|
1.0
|
C2D
|
B:CLA602
|
4.3
|
49.8
|
1.0
|
C3C
|
B:CLA602
|
4.4
|
49.8
|
1.0
|
C3A
|
B:CLA602
|
4.4
|
49.8
|
1.0
|
C2A
|
B:CLA602
|
4.5
|
49.8
|
1.0
|
CE2
|
B:PHE190
|
4.7
|
43.8
|
1.0
|
O
|
B:GLY186
|
4.8
|
46.7
|
1.0
|
CBD
|
B:CLA602
|
4.9
|
49.8
|
1.0
|
C
|
B:TRP185
|
5.0
|
42.8
|
1.0
|
C12
|
B:CLA602
|
5.0
|
49.8
|
1.0
|
|
Magnesium binding site 6 out
of 198 in 6kac
Go back to
Magnesium Binding Sites List in 6kac
Magnesium binding site 6 out
of 198 in the Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg603
b:38.4
occ:1.00
|
MG
|
B:CLA603
|
0.0
|
38.4
|
1.0
|
NB
|
B:CLA603
|
2.0
|
38.4
|
1.0
|
ND
|
B:CLA603
|
2.0
|
38.4
|
1.0
|
NC
|
B:CLA603
|
2.1
|
38.4
|
1.0
|
NA
|
B:CLA603
|
2.1
|
38.4
|
1.0
|
ND1
|
B:HIS201
|
2.2
|
36.1
|
1.0
|
CE1
|
B:HIS201
|
2.9
|
36.1
|
1.0
|
C4D
|
B:CLA603
|
2.9
|
38.4
|
1.0
|
C1B
|
B:CLA603
|
3.0
|
38.4
|
1.0
|
C4A
|
B:CLA603
|
3.1
|
38.4
|
1.0
|
C4B
|
B:CLA603
|
3.1
|
38.4
|
1.0
|
C1C
|
B:CLA603
|
3.1
|
38.4
|
1.0
|
C4C
|
B:CLA603
|
3.1
|
38.4
|
1.0
|
C1D
|
B:CLA603
|
3.1
|
38.4
|
1.0
|
C1A
|
B:CLA603
|
3.2
|
38.4
|
1.0
|
CHB
|
B:CLA603
|
3.4
|
38.4
|
1.0
|
CHC
|
B:CLA603
|
3.4
|
38.4
|
1.0
|
CG
|
B:HIS201
|
3.4
|
36.1
|
1.0
|
CHA
|
B:CLA603
|
3.5
|
38.4
|
1.0
|
CHD
|
B:CLA603
|
3.5
|
38.4
|
1.0
|
CZ
|
H:PHE60
|
3.9
|
41.4
|
1.0
|
CB
|
B:HIS201
|
4.0
|
36.1
|
1.0
|
NE2
|
B:HIS201
|
4.1
|
36.1
|
1.0
|
C3D
|
B:CLA603
|
4.2
|
38.4
|
1.0
|
C2B
|
B:CLA603
|
4.3
|
38.4
|
1.0
|
C3B
|
B:CLA603
|
4.3
|
38.4
|
1.0
|
C2C
|
B:CLA603
|
4.3
|
38.4
|
1.0
|
C2D
|
B:CLA603
|
4.3
|
38.4
|
1.0
|
C3C
|
B:CLA603
|
4.3
|
38.4
|
1.0
|
C3A
|
B:CLA603
|
4.4
|
38.4
|
1.0
|
CE2
|
H:PHE60
|
4.4
|
41.4
|
1.0
|
CD2
|
B:HIS201
|
4.4
|
36.1
|
1.0
|
C2A
|
B:CLA603
|
4.5
|
38.4
|
1.0
|
CA
|
B:HIS201
|
4.5
|
36.1
|
1.0
|
CE1
|
B:PHE190
|
4.7
|
43.8
|
1.0
|
CBD
|
B:CLA603
|
4.9
|
38.4
|
1.0
|
CMA
|
B:CLA603
|
5.0
|
38.4
|
1.0
|
|
Magnesium binding site 7 out
of 198 in 6kac
Go back to
Magnesium Binding Sites List in 6kac
Magnesium binding site 7 out
of 198 in the Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg604
b:31.8
occ:1.00
|
MG
|
B:CLA604
|
0.0
|
31.8
|
1.0
|
NB
|
B:CLA604
|
2.0
|
31.8
|
1.0
|
ND
|
B:CLA604
|
2.0
|
31.8
|
1.0
|
NC
|
B:CLA604
|
2.1
|
31.8
|
1.0
|
NA
|
B:CLA604
|
2.1
|
31.8
|
1.0
|
NE2
|
B:HIS202
|
2.2
|
35.8
|
1.0
|
C4D
|
B:CLA604
|
2.9
|
31.8
|
1.0
|
C1B
|
B:CLA604
|
3.0
|
31.8
|
1.0
|
C4B
|
B:CLA604
|
3.1
|
31.8
|
1.0
|
C4A
|
B:CLA604
|
3.1
|
31.8
|
1.0
|
C1C
|
B:CLA604
|
3.1
|
31.8
|
1.0
|
C4C
|
B:CLA604
|
3.1
|
31.8
|
1.0
|
C1A
|
B:CLA604
|
3.1
|
31.8
|
1.0
|
C1D
|
B:CLA604
|
3.1
|
31.8
|
1.0
|
CD2
|
B:HIS202
|
3.2
|
35.8
|
1.0
|
CE1
|
B:HIS202
|
3.2
|
35.8
|
1.0
|
CHB
|
B:CLA604
|
3.4
|
31.8
|
1.0
|
CHC
|
B:CLA604
|
3.4
|
31.8
|
1.0
|
CHA
|
B:CLA604
|
3.4
|
31.8
|
1.0
|
CHD
|
B:CLA604
|
3.5
|
31.8
|
1.0
|
C9
|
B:CLA606
|
4.1
|
41.3
|
1.0
|
C3D
|
B:CLA604
|
4.2
|
31.8
|
1.0
|
C2B
|
B:CLA604
|
4.3
|
31.8
|
1.0
|
C3B
|
B:CLA604
|
4.3
|
31.8
|
1.0
|
ND1
|
B:HIS202
|
4.3
|
35.8
|
1.0
|
C2D
|
B:CLA604
|
4.3
|
31.8
|
1.0
|
CG
|
B:HIS202
|
4.3
|
35.8
|
1.0
|
C2C
|
B:CLA604
|
4.3
|
31.8
|
1.0
|
C3C
|
B:CLA604
|
4.4
|
31.8
|
1.0
|
C3A
|
B:CLA604
|
4.4
|
31.8
|
1.0
|
C2A
|
B:CLA604
|
4.5
|
31.8
|
1.0
|
C4
|
B:CLA606
|
4.7
|
41.3
|
1.0
|
C5
|
B:CLA606
|
4.7
|
41.3
|
1.0
|
CE2
|
B:PHE153
|
4.9
|
38.2
|
1.0
|
CBD
|
B:CLA604
|
4.9
|
31.8
|
1.0
|
C3
|
B:CLA606
|
5.0
|
41.3
|
1.0
|
|
Magnesium binding site 8 out
of 198 in 6kac
Go back to
Magnesium Binding Sites List in 6kac
Magnesium binding site 8 out
of 198 in the Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg605
b:57.9
occ:1.00
|
MG
|
B:CLA605
|
0.0
|
57.9
|
1.0
|
NB
|
B:CLA605
|
2.0
|
57.9
|
1.0
|
ND
|
B:CLA605
|
2.0
|
57.9
|
1.0
|
NC
|
B:CLA605
|
2.1
|
57.9
|
1.0
|
NA
|
B:CLA605
|
2.1
|
57.9
|
1.0
|
NE2
|
B:HIS455
|
2.1
|
25.9
|
1.0
|
C4D
|
B:CLA605
|
2.9
|
57.9
|
1.0
|
CD2
|
B:HIS455
|
2.9
|
25.9
|
1.0
|
C1B
|
B:CLA605
|
3.0
|
57.9
|
1.0
|
C4B
|
B:CLA605
|
3.0
|
57.9
|
1.0
|
C4A
|
B:CLA605
|
3.1
|
57.9
|
1.0
|
C1C
|
B:CLA605
|
3.1
|
57.9
|
1.0
|
C1D
|
B:CLA605
|
3.1
|
57.9
|
1.0
|
C1A
|
B:CLA605
|
3.2
|
57.9
|
1.0
|
CE1
|
B:HIS455
|
3.2
|
25.9
|
1.0
|
C4C
|
B:CLA605
|
3.2
|
57.9
|
1.0
|
CHB
|
B:CLA605
|
3.4
|
57.9
|
1.0
|
CHC
|
B:CLA605
|
3.4
|
57.9
|
1.0
|
CHA
|
B:CLA605
|
3.5
|
57.9
|
1.0
|
CHD
|
B:CLA605
|
3.6
|
57.9
|
1.0
|
CG
|
B:HIS455
|
4.1
|
25.9
|
1.0
|
ND1
|
B:HIS455
|
4.2
|
25.9
|
1.0
|
C14
|
B:CLA613
|
4.2
|
43.2
|
1.0
|
C3D
|
B:CLA605
|
4.2
|
57.9
|
1.0
|
C2B
|
B:CLA605
|
4.3
|
57.9
|
1.0
|
C3B
|
B:CLA605
|
4.3
|
57.9
|
1.0
|
C2D
|
B:CLA605
|
4.3
|
57.9
|
1.0
|
C2C
|
B:CLA605
|
4.3
|
57.9
|
1.0
|
C3C
|
B:CLA605
|
4.4
|
57.9
|
1.0
|
C3A
|
B:CLA605
|
4.4
|
57.9
|
1.0
|
C2A
|
B:CLA605
|
4.5
|
57.9
|
1.0
|
C13
|
B:CLA613
|
4.8
|
43.2
|
1.0
|
CBB
|
B:CLA614
|
4.9
|
43.2
|
1.0
|
CBD
|
B:CLA605
|
4.9
|
57.9
|
1.0
|
CE1
|
B:PHE451
|
5.0
|
27.5
|
1.0
|
C15
|
B:CLA613
|
5.0
|
43.2
|
1.0
|
|
Magnesium binding site 9 out
of 198 in 6kac
Go back to
Magnesium Binding Sites List in 6kac
Magnesium binding site 9 out
of 198 in the Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg606
b:41.3
occ:1.00
|
MG
|
B:CLA606
|
0.0
|
41.3
|
1.0
|
NB
|
B:CLA606
|
2.0
|
41.3
|
1.0
|
ND
|
B:CLA606
|
2.0
|
41.3
|
1.0
|
NC
|
B:CLA606
|
2.1
|
41.3
|
1.0
|
NA
|
B:CLA606
|
2.1
|
41.3
|
1.0
|
NE2
|
B:HIS100
|
2.3
|
32.5
|
1.0
|
C4D
|
B:CLA606
|
2.9
|
41.3
|
1.0
|
C1B
|
B:CLA606
|
3.0
|
41.3
|
1.0
|
C4B
|
B:CLA606
|
3.0
|
41.3
|
1.0
|
C4A
|
B:CLA606
|
3.1
|
41.3
|
1.0
|
C1C
|
B:CLA606
|
3.1
|
41.3
|
1.0
|
C4C
|
B:CLA606
|
3.1
|
41.3
|
1.0
|
C1A
|
B:CLA606
|
3.1
|
41.3
|
1.0
|
C1D
|
B:CLA606
|
3.2
|
41.3
|
1.0
|
CD2
|
B:HIS100
|
3.2
|
32.5
|
1.0
|
CE1
|
B:HIS100
|
3.3
|
32.5
|
1.0
|
CHB
|
B:CLA606
|
3.4
|
41.3
|
1.0
|
CHC
|
B:CLA606
|
3.4
|
41.3
|
1.0
|
CHA
|
B:CLA606
|
3.4
|
41.3
|
1.0
|
CHD
|
B:CLA606
|
3.5
|
41.3
|
1.0
|
C1
|
B:CLA605
|
3.9
|
57.9
|
1.0
|
C2
|
B:CLA605
|
4.2
|
57.9
|
1.0
|
C3D
|
B:CLA606
|
4.2
|
41.3
|
1.0
|
C2B
|
B:CLA606
|
4.3
|
41.3
|
1.0
|
C3B
|
B:CLA606
|
4.3
|
41.3
|
1.0
|
C2C
|
B:CLA606
|
4.3
|
41.3
|
1.0
|
C2D
|
B:CLA606
|
4.3
|
41.3
|
1.0
|
C3C
|
B:CLA606
|
4.4
|
41.3
|
1.0
|
ND1
|
B:HIS100
|
4.4
|
32.5
|
1.0
|
CG
|
B:HIS100
|
4.4
|
32.5
|
1.0
|
C3A
|
B:CLA606
|
4.4
|
41.3
|
1.0
|
C2A
|
B:CLA606
|
4.5
|
41.3
|
1.0
|
C3
|
B:CLA605
|
4.7
|
57.9
|
1.0
|
CBD
|
B:CLA606
|
4.9
|
41.3
|
1.0
|
|
Magnesium binding site 10 out
of 198 in 6kac
Go back to
Magnesium Binding Sites List in 6kac
Magnesium binding site 10 out
of 198 in the Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Cryo-Em Structure of the C2S2-Type Psii-Lhcii Supercomplex From Chlamydomonas Reihardtii within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg607
b:38.9
occ:1.00
|
MG
|
B:CLA607
|
0.0
|
38.9
|
1.0
|
ND
|
B:CLA607
|
2.0
|
38.9
|
1.0
|
NB
|
B:CLA607
|
2.0
|
38.9
|
1.0
|
NC
|
B:CLA607
|
2.1
|
38.9
|
1.0
|
NA
|
B:CLA607
|
2.1
|
38.9
|
1.0
|
ND1
|
B:HIS157
|
2.2
|
39.7
|
1.0
|
CE1
|
B:HIS157
|
2.6
|
39.7
|
1.0
|
C4D
|
B:CLA607
|
2.9
|
38.9
|
1.0
|
C1B
|
B:CLA607
|
3.0
|
38.9
|
1.0
|
C4A
|
B:CLA607
|
3.1
|
38.9
|
1.0
|
C4B
|
B:CLA607
|
3.1
|
38.9
|
1.0
|
C1C
|
B:CLA607
|
3.1
|
38.9
|
1.0
|
C1D
|
B:CLA607
|
3.1
|
38.9
|
1.0
|
C4C
|
B:CLA607
|
3.2
|
38.9
|
1.0
|
C1A
|
B:CLA607
|
3.2
|
38.9
|
1.0
|
CG
|
B:HIS157
|
3.3
|
39.7
|
1.0
|
CHB
|
B:CLA607
|
3.4
|
38.9
|
1.0
|
CHC
|
B:CLA607
|
3.4
|
38.9
|
1.0
|
CHA
|
B:CLA607
|
3.5
|
38.9
|
1.0
|
CHD
|
B:CLA607
|
3.5
|
38.9
|
1.0
|
NE2
|
B:HIS157
|
3.8
|
39.7
|
1.0
|
CB
|
B:HIS157
|
4.0
|
39.7
|
1.0
|
CD2
|
B:HIS157
|
4.2
|
39.7
|
1.0
|
C3D
|
B:CLA607
|
4.2
|
38.9
|
1.0
|
C2B
|
B:CLA607
|
4.3
|
38.9
|
1.0
|
C3B
|
B:CLA607
|
4.3
|
38.9
|
1.0
|
C2D
|
B:CLA607
|
4.3
|
38.9
|
1.0
|
C2C
|
B:CLA607
|
4.3
|
38.9
|
1.0
|
C3C
|
B:CLA607
|
4.4
|
38.9
|
1.0
|
C3A
|
B:CLA607
|
4.4
|
38.9
|
1.0
|
C2A
|
B:CLA607
|
4.5
|
38.9
|
1.0
|
CD
|
B:PRO164
|
4.8
|
42.9
|
1.0
|
CBD
|
B:CLA607
|
4.9
|
38.9
|
1.0
|
CA
|
B:HIS157
|
5.0
|
39.7
|
1.0
|
|
Reference:
X.Sheng,
A.J.Li,
D.F.Song,
Z.F.Liu.
Supramolecular Insights Intobasis of Light Harvesting For Photosystem II in Green Algae To Be Published.
Page generated: Tue Oct 1 06:49:03 2024
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