Magnesium in PDB 6kl9: Structure of LBCAS12A-Crrna Complex Bound to ACRVA4 (Form A Complex)

The binding sites of Magnesium atom in the Structure of LBCAS12A-Crrna Complex Bound to ACRVA4 (Form A Complex) (pdb code 6kl9). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of LBCAS12A-Crrna Complex Bound to ACRVA4 (Form A Complex), PDB code: 6kl9:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of LBCAS12A-Crrna Complex Bound to ACRVA4 (Form A Complex)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of LBCAS12A-Crrna Complex Bound to ACRVA4 (Form A Complex) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1301 b:30.2 occ:1.00 OP2 G:A17 2.5 25.4 1.0 O A:THR716 2.5 23.6 1.0 C A:THR716 3.7 23.6 1.0 P G:A17 3.9 25.4 1.0 OP2 G:U16 4.0 29.1 1.0 O5' G:A17 4.4 25.4 1.0 CA A:PRO717 4.4 22.5 1.0 N A:THR716 4.4 23.6 1.0 OD1 A:ASP708 4.5 25.6 1.0 C3' G:U16 4.5 29.1 1.0 N A:PRO717 4.6 22.5 1.0 C A:PRO717 4.6 22.5 1.0 N7 G:A17 4.6 25.4 1.0 C8 G:A17 4.7 25.4 1.0 CA A:THR716 4.7 23.6 1.0 P G:U16 4.7 29.1 1.0 O3' G:U16 4.7 29.1 1.0 O5' G:U16 4.7 29.1 1.0 O A:PRO717 4.8 22.5 1.0 OD1 A:ASN718 4.9 23.1 1.0 OP1 G:U16 4.9 29.1 1.0 OP1 G:A17 5.0 25.4 1.0

Magnesium binding site 2 out of 2 in the Structure of LBCAS12A-Crrna Complex Bound to ACRVA4 (Form A Complex)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of LBCAS12A-Crrna Complex Bound to ACRVA4 (Form A Complex) within 5.0Å range: probe atom residue distance (Å) B Occ G:Mg101 b:36.8 occ:1.00 O G:HOH202 2.0 42.9 1.0 O G:HOH205 2.0 41.2 1.0 O G:HOH204 2.0 41.1 1.0 O G:HOH206 2.0 40.9 1.0 O G:HOH201 2.0 42.2 1.0 O G:HOH203 2.1 42.1 1.0 OP2 G:A8 3.9 23.0 1.0 O4 G:U3 4.3 23.4 1.0 OP2 G:U7 4.7 21.9 1.0 N7 G:A8 4.7 23.0 1.0 CD B:LYS202 4.8 48.0 1.0 OP1 G:A2 5.0 29.1 1.0

R.Peng, Z.Li, Y.Xu, S.He, Q.Peng, L.A.Wu, Y.Wu, J.Qi, P.Wang, Y.Shi, G.F.Gao. Structural Insight Into Multistage Inhibition of Crispr-CAS12A By ACRVA4. Proc.Natl.Acad.Sci.Usa V. 116 18928 2019.
ISSN: ESSN 1091-6490
PubMed: 31467167
DOI: 10.1073/PNAS.1909400116