Magnesium in PDB 6leb: Staphylococcus Aureus Surface Protein Sdrc Mutant-P366H

The structure of Staphylococcus Aureus Surface Protein Sdrc Mutant-P366H, PDB code: 6leb was solved by T.R.Hang, M.Zhang, J.C.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 1.54
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	63.734, 87.130, 63.974, 90.00, 97.99, 90.00
R / Rfree (%)	12.6 / 17.7

The binding sites of Magnesium atom in the Staphylococcus Aureus Surface Protein Sdrc Mutant-P366H (pdb code 6leb). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Staphylococcus Aureus Surface Protein Sdrc Mutant-P366H, PDB code: 6leb:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Staphylococcus Aureus Surface Protein Sdrc Mutant-P366H


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Staphylococcus Aureus Surface Protein Sdrc Mutant-P366H within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:20.5 occ:1.00 O A:HOH688 2.0 26.1 1.0 O A:VAL288 2.2 21.4 1.0 O A:VAL232 2.2 18.1 1.0 O A:HOH706 2.2 26.4 1.0 O A:ASP230 2.3 21.7 1.0 O A:HOH764 2.3 18.3 1.0 C A:ASP230 3.3 16.9 1.0 C A:VAL288 3.4 16.7 1.0 C A:VAL232 3.4 17.9 1.0 N A:VAL232 3.8 19.2 1.0 CA A:ASP230 4.0 17.7 1.0 O B:HOH639 4.0 36.1 1.0 OD1 A:ASP289 4.0 28.8 1.0 CA A:VAL232 4.1 16.2 1.0 C A:SER231 4.1 22.1 1.0 O A:HOH891 4.1 19.9 1.0 CB A:VAL288 4.2 16.8 1.0 N A:ASP289 4.2 15.3 1.0 CA A:VAL288 4.3 14.8 1.0 CA A:ASP289 4.3 19.4 1.0 N A:SER231 4.3 17.2 1.0 O A:ASP229 4.4 17.3 1.0 N A:LYS233 4.4 17.6 1.0 CA A:SER231 4.5 20.4 1.0 O A:TYR291 4.5 15.8 1.0 CB A:VAL232 4.6 14.7 1.0 O A:SER231 4.7 24.0 1.0 CA A:LYS233 4.7 20.2 1.0 CG2 A:VAL288 4.7 18.1 1.0 CB A:ASP230 4.8 19.0 1.0 O A:HOH974 4.9 53.0 1.0 NZ B:LYS495 4.9 47.4 1.0

Magnesium binding site 2 out of 2 in the Staphylococcus Aureus Surface Protein Sdrc Mutant-P366H


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Staphylococcus Aureus Surface Protein Sdrc Mutant-P366H within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg501 b:16.7 occ:1.00 O B:HOH825 2.1 14.0 1.0 O B:VAL288 2.2 14.7 1.0 O B:VAL232 2.2 14.0 1.0 O B:HOH783 2.2 19.5 1.0 O B:ASP230 2.2 17.9 1.0 O B:HOH845 2.2 20.8 1.0 C B:ASP230 3.2 18.2 1.0 C B:VAL288 3.3 14.3 1.0 C B:VAL232 3.4 13.1 1.0 N B:VAL232 3.8 15.7 1.0 CA B:ASP230 3.8 17.4 1.0 O B:HOH866 4.0 17.6 1.0 O A:HOH603 4.0 31.6 1.0 CA B:VAL232 4.1 15.0 1.0 C B:SER231 4.1 17.3 1.0 CB B:VAL288 4.2 12.0 1.0 OD1 B:ASP289 4.2 18.9 1.0 N B:SER231 4.2 17.0 1.0 CA B:VAL288 4.2 11.6 1.0 O B:ASP229 4.3 14.6 1.0 N B:ASP289 4.3 13.6 1.0 CA B:ASP289 4.3 12.2 1.0 N B:LYS233 4.4 12.9 1.0 O B:TYR291 4.5 15.6 1.0 CA B:SER231 4.5 19.0 1.0 CB B:VAL232 4.5 11.8 1.0 NZ A:LYS495 4.6 48.5 1.0 O B:SER231 4.6 18.9 1.0 CB B:ASP230 4.7 20.3 1.0 CG2 B:VAL288 4.7 14.5 1.0 CA B:LYS233 4.7 15.1 1.0 N B:ASP230 5.0 18.4 1.0

T.R.Hang, M.Zhang, J.C.Wang. Structure of Staphylococcus Aureus Surface Protein Sdrc Mutant-P366H at 1.55 Angstroms Resolution To Be Published.