Magnesium in PDB 6ls3: Cubic-Shaped Crystal of Tmftn Mutant-T4FY Stimulated By Mg

All present enzymatic activity of Cubic-Shaped Crystal of Tmftn Mutant-T4FY Stimulated By Mg:
1.16.3.2;

The structure of Cubic-Shaped Crystal of Tmftn Mutant-T4FY Stimulated By Mg, PDB code: 6ls3 was solved by G.Zhao, X.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	138.70 / 2.82
Space group	H 3 2 1
Cell size a, b, c (Å), α, β, γ (°)	171.737, 171.737, 384.289, 90, 90, 120
R / Rfree (%)	18.7 / 24.3

The structure of Cubic-Shaped Crystal of Tmftn Mutant-T4FY Stimulated By Mg also contains other interesting chemical elements:

Iron

(Fe)

15 atoms

The binding sites of Magnesium atom in the Cubic-Shaped Crystal of Tmftn Mutant-T4FY Stimulated By Mg (pdb code 6ls3). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the Cubic-Shaped Crystal of Tmftn Mutant-T4FY Stimulated By Mg, PDB code: 6ls3:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in the Cubic-Shaped Crystal of Tmftn Mutant-T4FY Stimulated By Mg


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cubic-Shaped Crystal of Tmftn Mutant-T4FY Stimulated By Mg within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg203 b:81.2 occ:1.00 OE2 B:GLU132 2.5 78.6 1.0 OE2 B:GLU51 2.9 78.2 1.0 OE2 B:GLU128 2.9 75.0 1.0 OE1 B:GLU51 3.1 78.5 1.0 CD B:GLU51 3.4 79.9 1.0 CD B:GLU132 3.7 72.0 1.0 NE2 B:GLN135 3.7 95.9 1.0 CD B:GLU128 3.9 67.2 1.0 CD B:GLN135 4.1 82.3 1.0 OE1 B:GLN135 4.1 77.5 1.0 OE1 B:GLU128 4.4 65.1 1.0 OE1 B:GLU132 4.4 70.8 1.0 CG B:GLU132 4.7 62.3 1.0 OE1 B:GLU131 4.7 85.0 1.0 CG B:GLU51 4.8 66.6 1.0 CB B:GLU131 4.9 60.7 1.0 CG B:GLU128 4.9 60.2 1.0

Magnesium binding site 2 out of 4 in the Cubic-Shaped Crystal of Tmftn Mutant-T4FY Stimulated By Mg


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cubic-Shaped Crystal of Tmftn Mutant-T4FY Stimulated By Mg within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg203 b:81.3 occ:1.00 OE2 A:GLU132 2.3 82.0 1.0 NE2 A:GLN135 2.7 89.3 1.0 OE2 A:GLU51 2.8 83.2 1.0 OE1 A:GLU51 2.9 82.9 1.0 CD A:GLU51 3.2 80.5 1.0 OE1 A:GLN135 3.4 81.1 1.0 CD A:GLN135 3.4 86.7 1.0 CD A:GLU132 3.4 77.4 1.0 OE1 A:GLU128 3.7 78.8 1.0 OE1 A:GLU132 4.0 77.2 1.0 OE1 A:GLU131 4.1 94.0 1.0 CG A:GLU132 4.6 68.2 1.0 OE1 A:GLN48 4.6 64.9 1.0 CG A:GLU51 4.7 60.4 1.0 NH2 A:ARG163 4.7 59.6 1.0 CD A:GLU128 4.8 79.0 1.0 CG A:GLN135 4.8 71.8 1.0 NE2 A:GLN48 5.0 60.1 1.0

Magnesium binding site 3 out of 4 in the Cubic-Shaped Crystal of Tmftn Mutant-T4FY Stimulated By Mg


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Cubic-Shaped Crystal of Tmftn Mutant-T4FY Stimulated By Mg within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg203 b:83.7 occ:1.00 OE1 D:GLU51 2.9 79.9 1.0 OE2 D:GLU51 2.9 69.1 1.0 OE2 D:GLU132 2.9 75.9 1.0 OE1 D:GLU131 3.0 85.5 1.0 CD D:GLU51 3.1 76.5 1.0 NE2 D:GLN135 3.3 89.9 1.0 OE2 D:GLU128 3.4 76.7 1.0 CD D:GLU132 4.1 76.3 1.0 CD D:GLN135 4.2 90.0 1.0 CD D:GLU131 4.3 90.0 1.0 OE1 D:GLN135 4.3 81.9 1.0 CG D:GLU51 4.5 64.7 1.0 CD D:GLU128 4.5 76.4 1.0 NH2 D:ARG163 4.8 65.6 1.0 OE1 D:GLU132 4.9 73.3 1.0 CG D:GLU128 4.9 66.0 1.0 CG D:GLU132 5.0 69.8 1.0 OE2 D:GLU131 5.0 85.5 1.0

Magnesium binding site 4 out of 4 in the Cubic-Shaped Crystal of Tmftn Mutant-T4FY Stimulated By Mg


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Cubic-Shaped Crystal of Tmftn Mutant-T4FY Stimulated By Mg within 5.0Å range: probe atom residue distance (Å) B Occ H:Mg202 b:79.8 occ:1.00 OE2 H:GLU132 2.6 75.1 1.0 OE1 H:GLU51 2.7 73.0 1.0 OE2 H:GLU128 2.8 73.5 1.0 NE2 H:GLN135 3.2 78.3 1.0 OE1 H:GLU131 3.2 80.9 1.0 OE2 H:GLU51 3.3 71.4 1.0 CD H:GLU51 3.4 71.2 1.0 OE1 H:GLN135 3.6 79.6 1.0 CD H:GLU132 3.6 77.2 1.0 CD H:GLN135 3.7 86.3 1.0 CD H:GLU128 3.9 74.7 1.0 CG H:GLU132 4.0 69.6 1.0 CD H:GLU131 4.3 83.4 1.0 OE1 H:GLU128 4.4 68.2 1.0 CG H:GLU131 4.7 79.3 1.0 OE1 H:GLU132 4.8 75.0 1.0 CG H:GLU51 4.9 59.6 1.0 NH2 H:ARG163 4.9 61.7 1.0 CA H:GLU132 5.0 66.8 1.0

G.Zhao, X.Zhang. Cubic-Shaped Crystal of Tmftn Mutant-T4FY Stimulated By Mg To Be Published.