Magnesium in PDB 6m8h: Crystal Structure of the R208Q Mutant of G(I) Subunit Alpha-1

Protein crystallography data

The structure of Crystal Structure of the R208Q Mutant of G(I) Subunit Alpha-1, PDB code: 6m8h was solved by R.Mascarenhas, J.Goossens, B.Leverson, S.Kothawala, M.Ballicora, K.Olsen, D.De Freitas, D.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.86 / 2.07
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 79.558, 79.558, 105.421, 90.00, 90.00, 120.00
R / Rfree (%) 16.5 / 19.7

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the R208Q Mutant of G(I) Subunit Alpha-1 (pdb code 6m8h). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the R208Q Mutant of G(I) Subunit Alpha-1, PDB code: 6m8h:

Magnesium binding site 1 out of 1 in 6m8h

Go back to Magnesium Binding Sites List in 6m8h
Magnesium binding site 1 out of 1 in the Crystal Structure of the R208Q Mutant of G(I) Subunit Alpha-1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the R208Q Mutant of G(I) Subunit Alpha-1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:27.2
occ:1.00
O A:HOH514 2.0 21.2 1.0
OG A:SER47 2.1 12.8 0.7
O3G A:GSP401 2.1 30.3 1.0
O2B A:GSP401 2.1 12.8 1.0
OG1 A:THR181 2.1 25.1 1.0
O A:HOH528 2.3 20.9 1.0
CB A:SER47 3.0 20.0 0.7
CB A:SER47 3.0 19.9 0.3
CB A:THR181 3.1 23.8 1.0
PB A:GSP401 3.4 14.9 1.0
PG A:GSP401 3.4 32.2 1.0
OD2 A:ASP200 3.6 23.8 1.0
OG A:SER47 3.6 21.0 0.3
O3B A:GSP401 3.7 20.9 1.0
N A:SER47 3.7 17.4 1.0
CA A:SER47 3.9 17.3 0.3
CA A:SER47 3.9 17.2 0.7
CG2 A:THR181 4.0 22.6 1.0
O2G A:GSP401 4.1 25.7 1.0
OD1 A:ASP200 4.1 23.4 1.0
N A:THR181 4.2 20.7 1.0
O1B A:GSP401 4.2 17.1 1.0
CA A:THR181 4.2 24.1 1.0
CG A:ASP200 4.3 17.9 1.0
O2A A:GSP401 4.3 20.3 1.0
O A:HOH597 4.4 44.9 1.0
O3A A:GSP401 4.5 16.7 1.0
O A:HOH668 4.5 37.2 1.0
O A:VAL201 4.6 29.2 1.0
O A:VAL179 4.6 18.9 1.0
CB A:LYS46 4.7 14.6 1.0
PA A:GSP401 4.7 15.1 1.0
CE A:LYS46 4.8 17.1 1.0
C A:LYS46 4.8 20.3 1.0
O1A A:GSP401 4.8 16.9 1.0
S1G A:GSP401 4.9 34.6 1.0

Reference:

J.L.Goossens, B.D.Leverson, S.Kothawala, R.Mascarenhas, D.Liu, M.Ballicora, K.W.Olsen, D.M.De Freitas. Functional Consequences of Oncogenic Mutations in the Switch II Region of GALPHAI1 and Galphas Proteins To Be Published.
Page generated: Mon Dec 14 23:36:48 2020

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