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Magnesium in PDB 6mqb: Crystal Structure of Gtpase Domain of Human Septin 12 in Complex with Gmppnp in Space Group C2221

Protein crystallography data

The structure of Crystal Structure of Gtpase Domain of Human Septin 12 in Complex with Gmppnp in Space Group C2221, PDB code: 6mqb was solved by D.K.S.V.Castro, H.M.Pereira, J.Brandao-Neto, A.P.U.Ulian, R.C.Garratt, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.93 / 2.12
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 41.020, 91.860, 151.680, 90.00, 90.00, 90.00
R / Rfree (%) 20 / 24.8

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Gtpase Domain of Human Septin 12 in Complex with Gmppnp in Space Group C2221 (pdb code 6mqb). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Gtpase Domain of Human Septin 12 in Complex with Gmppnp in Space Group C2221, PDB code: 6mqb:

Magnesium binding site 1 out of 1 in 6mqb

Go back to Magnesium Binding Sites List in 6mqb
Magnesium binding site 1 out of 1 in the Crystal Structure of Gtpase Domain of Human Septin 12 in Complex with Gmppnp in Space Group C2221


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Gtpase Domain of Human Septin 12 in Complex with Gmppnp in Space Group C2221 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:29.9
occ:1.00
O1G A:GNP401 2.0 32.1 1.0
O1B A:GNP401 2.1 27.0 1.0
O A:HOH521 2.1 31.7 1.0
O A:HOH522 2.1 32.2 1.0
OG1 A:THR89 2.1 31.0 1.0
OG A:SER63 2.1 32.4 1.0
PG A:GNP401 3.0 32.1 1.0
CB A:THR89 3.1 31.2 1.0
PB A:GNP401 3.2 26.0 1.0
CB A:SER63 3.2 33.6 1.0
N3B A:GNP401 3.4 29.7 1.0
O3G A:GNP401 3.5 30.8 1.0
N A:THR89 3.7 38.2 1.0
N A:SER63 3.9 32.6 1.0
CA A:THR89 4.0 37.8 1.0
O2A A:GNP401 4.0 33.3 1.0
OD2 A:ASP112 4.1 36.6 1.0
O2B A:GNP401 4.1 26.2 1.0
CA A:SER63 4.1 30.7 1.0
OD1 A:ASP112 4.1 36.5 1.0
CG2 A:THR89 4.2 31.4 1.0
O A:HOH526 4.3 50.8 1.0
O3A A:GNP401 4.3 29.0 1.0
O2G A:GNP401 4.4 27.8 1.0
CG A:ASP112 4.5 37.0 1.0
PA A:GNP401 4.5 29.7 1.0
O A:THR113 4.5 36.0 1.0
O1A A:GNP401 4.6 29.0 1.0
O A:PRO87 4.6 35.7 1.0
C A:GLN88 4.9 39.2 1.0
CB A:LYS62 4.9 24.2 1.0
C A:LYS62 5.0 29.7 1.0
NZ A:LYS62 5.0 25.1 1.0

Reference:

D.K.S.V.Castro, H.M.Pereira, J.Brandao-Neto, A.P.U.Ulian, R.C.Garratt. Crystal Structure of Gtpase Domain of Human Septin 12 To Be Published.
Page generated: Tue Oct 1 11:56:53 2024

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