Magnesium in PDB 6n9u: Structure of Bacteriophage T7 Lagging-Strand Dna Polymerase (D5A/E7A) Interacting with Primase Domains of Two GP4 Subunits Bound to An Rna/Dna Hybrid and Dttp (From LAGS1)

Enzymatic activity of Structure of Bacteriophage T7 Lagging-Strand Dna Polymerase (D5A/E7A) Interacting with Primase Domains of Two GP4 Subunits Bound to An Rna/Dna Hybrid and Dttp (From LAGS1)

Other elements in 6n9u:

Magnesium Binding Sites:

Magnesium binding site 1 out of 2 in 6n9u

Magnesium Binding Sites List in 6n9u

Magnesium binding site 1 out of 2 in the Structure of Bacteriophage T7 Lagging-Strand Dna Polymerase (D5A/E7A) Interacting with Primase Domains of Two GP4 Subunits Bound to An Rna/Dna Hybrid and Dttp (From LAGS1)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Bacteriophage T7 Lagging-Strand Dna Polymerase (D5A/E7A) Interacting with Primase Domains of Two GP4 Subunits Bound to An Rna/Dna Hybrid and Dttp (From LAGS1) within 5.0Å range: probe atom residue distance (Å) B Occ H:Mg802 b:41.4 occ:1.00 OD2 H:ASP654 2.2 37.4 1.0 O H:ALA476 2.3 40.7 1.0 O2B H:TTP801 2.3 49.0 1.0 O1G H:TTP801 2.3 49.0 1.0 O2A H:TTP801 2.4 49.0 1.0 OD1 H:ASP475 2.5 39.7 1.0 OD2 H:ASP475 3.0 39.7 1.0 CG H:ASP475 3.0 39.7 1.0 CG H:ASP654 3.4 37.4 1.0 C H:ALA476 3.5 40.7 1.0 PB H:TTP801 3.6 49.0 1.0 PG H:TTP801 3.7 49.0 1.0 PA H:TTP801 3.7 49.0 1.0 O3B H:TTP801 4.0 49.0 1.0 O3A H:TTP801 4.0 49.0 1.0 OD1 H:ASP654 4.1 37.4 1.0 N H:ALA476 4.3 40.7 1.0 CB H:ASP654 4.3 37.4 1.0 N H:SER477 4.4 44.5 1.0 C5' H:TTP801 4.4 49.0 1.0 CA H:SER477 4.4 44.5 1.0 CB H:ASP475 4.5 39.7 1.0 O3G H:TTP801 4.5 49.0 1.0 CA H:ALA476 4.5 40.7 1.0 O5' H:TTP801 4.7 49.0 1.0 O2G H:TTP801 4.7 49.0 1.0 O1A H:TTP801 4.7 49.0 1.0 O1B H:TTP801 4.8 49.0 1.0 C H:ASP475 4.8 39.7 1.0 N H:GLY478 5.0 46.4 1.0

Magnesium binding site 2 out of 2 in 6n9u

Magnesium Binding Sites List in 6n9u

Magnesium binding site 2 out of 2 in the Structure of Bacteriophage T7 Lagging-Strand Dna Polymerase (D5A/E7A) Interacting with Primase Domains of Two GP4 Subunits Bound to An Rna/Dna Hybrid and Dttp (From LAGS1)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of Bacteriophage T7 Lagging-Strand Dna Polymerase (D5A/E7A) Interacting with Primase Domains of Two GP4 Subunits Bound to An Rna/Dna Hybrid and Dttp (From LAGS1) within 5.0Å range: probe atom residue distance (Å) B Occ H:Mg803 b:19.8 occ:1.00 O H:HIS59 3.6 35.7 1.0 OD2 H:ASP65 4.2 36.2 1.0 OD2 H:ASP174 4.4 43.9 1.0 C H:HIS59 4.7 35.7 1.0 O H:ILE6 4.8 35.1 1.0 CG2 H:ILE6 4.9 35.1 1.0

Reference: