Magnesium in PDB 6nc1: Ftsy-Ng High-Resolution

The structure of Ftsy-Ng High-Resolution, PDB code: 6nc1 was solved by S.F.Ataide, C.Faoro, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	37.99 / 1.60
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	34.367, 75.980, 108.265, 90.00, 90.30, 90.00
R / Rfree (%)	17 / 20.1

The structure of Ftsy-Ng High-Resolution also contains other interesting chemical elements:

Potassium

(K)

4 atoms

The binding sites of Magnesium atom in the Ftsy-Ng High-Resolution (pdb code 6nc1). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Ftsy-Ng High-Resolution, PDB code: 6nc1:

Magnesium binding site 1 out of 1 in the Ftsy-Ng High-Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Ftsy-Ng High-Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg503 b:20.0 occ:1.00 OG1 A:THR307 2.0 0.5 1.0 O A:HOH621 2.2 20.0 1.0 O A:HOH782 2.2 20.0 1.0 O A:HOH750 2.2 20.0 1.0 O A:HOH609 2.2 20.0 1.0 O1B A:GDP501 2.2 20.0 1.0 H1 A:HOH621 2.8 20.0 1.0 H1 A:HOH782 2.8 20.0 1.0 H1 A:HOH609 2.8 20.0 1.0 H1 A:HOH750 2.8 20.0 1.0 HH12 A:ARG333 3.3 79.2 1.0 CB A:THR307 3.4 61.6 1.0 H A:THR307 3.4 29.1 1.0 PB A:GDP501 3.4 20.0 1.0 HB A:THR307 3.6 73.9 1.0 O2B A:GDP501 3.8 20.0 1.0 HB3 A:LYS306 3.8 28.5 1.0 N A:THR307 3.9 24.3 1.0 NH1 A:ARG333 4.0 66.0 1.0 HH11 A:ARG333 4.1 79.2 1.0 CA A:THR307 4.2 26.2 1.0 OD2 A:ASP382 4.2 90.7 1.0 HD2 A:LYS306 4.3 40.1 1.0 HA A:THR307 4.3 31.5 1.0 OD2 A:ASP330 4.4 32.4 1.0 OD1 A:ASN302 4.4 47.9 1.0 O3B A:GDP501 4.4 20.0 1.0 O A:HOH647 4.4 0.2 1.0 CG2 A:THR307 4.5 59.9 1.0 HG21 A:THR307 4.5 71.9 1.0 O3A A:GDP501 4.5 20.0 1.0 OD1 A:ASP382 4.6 56.2 1.0 PA A:GDP501 4.6 20.0 1.0 HG23 A:THR307 4.6 71.9 1.0 HB1 A:ALA336 4.7 32.3 1.0 O2A A:GDP501 4.7 20.0 1.0 CB A:LYS306 4.8 23.7 1.0 CG A:ASP382 4.8 42.5 1.0 HA A:ASN302 4.9 34.4 1.0 O1A A:GDP501 4.9 20.0 1.0 C A:LYS306 5.0 22.7 1.0 HE3 A:LYS306 5.0 39.3 1.0

C.Faoro, S.F.Ataide. Structural Insights Into the G-Loop Dynamics of E. Coli Ftsy Ng Domain. J.Struct.Biol. V. 208 2019.
ISSN: ESSN 1095-8657
PubMed: 31520694
DOI: 10.1016/J.JSB.2019.09.004