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Magnesium in PDB 6nme: Structure of LBCAS12A-Crrna

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of LBCAS12A-Crrna (pdb code 6nme). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of LBCAS12A-Crrna, PDB code: 6nme:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 6nme

Go back to Magnesium Binding Sites List in 6nme
Magnesium binding site 1 out of 2 in the Structure of LBCAS12A-Crrna


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of LBCAS12A-Crrna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1301

b:53.3
occ:1.00
O A:THR716 2.0 1.0 1.0
OP2 G:A19 3.1 1.0 1.0
C A:THR716 3.2 1.0 1.0
CA A:PRO717 3.9 1.0 1.0
N A:PRO717 4.0 1.0 1.0
O5' G:A19 4.1 1.0 1.0
CA A:THR716 4.1 1.0 1.0
C A:PRO717 4.2 1.0 1.0
P G:A19 4.2 1.0 1.0
O A:PRO717 4.3 1.0 1.0
CB A:THR716 4.3 1.0 1.0
N A:THR716 4.3 1.0 1.0
OP2 G:U18 4.6 1.0 1.0
C8 G:A19 4.6 1.0 1.0
N7 G:A19 4.6 1.0 1.0
N A:ASN718 4.9 1.0 1.0
O5' G:U18 5.0 1.0 1.0

Magnesium binding site 2 out of 2 in 6nme

Go back to Magnesium Binding Sites List in 6nme
Magnesium binding site 2 out of 2 in the Structure of LBCAS12A-Crrna


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of LBCAS12A-Crrna within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Mg101

b:42.6
occ:1.00
O G:HOH201 1.9 40.1 1.0
O G:HOH202 2.0 35.3 1.0
O G:HOH204 2.0 41.0 1.0
O G:HOH203 2.0 45.7 1.0
O G:HOH206 2.0 49.4 1.0
O G:HOH205 2.1 37.4 1.0
O4 G:U5 3.7 1.0 1.0
OP2 G:U9 3.7 1.0 1.0
OP2 G:A10 3.7 1.0 1.0
OP2 G:A4 4.6 1.0 1.0
P G:U9 4.7 1.0 1.0
O5' G:U9 4.8 1.0 1.0
C4 G:U5 4.8 1.0 1.0

Reference:

H.Zhang, Z.Li, C.M.Daczkowski, C.Gabel, A.D.Mesecar, L.Chang. Structural Basis For the Inhibition of Crispr-CAS12A By Anti-Crispr Proteins. Cell Host Microbe V. 25 815 2019.
ISSN: ESSN 1934-6069
PubMed: 31155345
DOI: 10.1016/J.CHOM.2019.05.004
Page generated: Tue Oct 1 12:46:26 2024

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