Atomistry » Magnesium » PDB 6njw-6nol » 6nme
Atomistry »
  Magnesium »
    PDB 6njw-6nol »
      6nme »

Magnesium in PDB 6nme: Structure of LBCAS12A-Crrna

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of LBCAS12A-Crrna (pdb code 6nme). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of LBCAS12A-Crrna, PDB code: 6nme:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 6nme

Go back to Magnesium Binding Sites List in 6nme
Magnesium binding site 1 out of 2 in the Structure of LBCAS12A-Crrna


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of LBCAS12A-Crrna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1301

b:53.3
occ:1.00
O A:THR716 2.0 1.0 1.0
OP2 G:A19 3.1 1.0 1.0
C A:THR716 3.2 1.0 1.0
CA A:PRO717 3.9 1.0 1.0
N A:PRO717 4.0 1.0 1.0
O5' G:A19 4.1 1.0 1.0
CA A:THR716 4.1 1.0 1.0
C A:PRO717 4.2 1.0 1.0
P G:A19 4.2 1.0 1.0
O A:PRO717 4.3 1.0 1.0
CB A:THR716 4.3 1.0 1.0
N A:THR716 4.3 1.0 1.0
OP2 G:U18 4.6 1.0 1.0
C8 G:A19 4.6 1.0 1.0
N7 G:A19 4.6 1.0 1.0
N A:ASN718 4.9 1.0 1.0
O5' G:U18 5.0 1.0 1.0

Magnesium binding site 2 out of 2 in 6nme

Go back to Magnesium Binding Sites List in 6nme
Magnesium binding site 2 out of 2 in the Structure of LBCAS12A-Crrna


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of LBCAS12A-Crrna within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Mg101

b:42.6
occ:1.00
O G:HOH201 1.9 40.1 1.0
O G:HOH202 2.0 35.3 1.0
O G:HOH204 2.0 41.0 1.0
O G:HOH203 2.0 45.7 1.0
O G:HOH206 2.0 49.4 1.0
O G:HOH205 2.1 37.4 1.0
O4 G:U5 3.7 1.0 1.0
OP2 G:U9 3.7 1.0 1.0
OP2 G:A10 3.7 1.0 1.0
OP2 G:A4 4.6 1.0 1.0
P G:U9 4.7 1.0 1.0
O5' G:U9 4.8 1.0 1.0
C4 G:U5 4.8 1.0 1.0

Reference:

H.Zhang, Z.Li, C.M.Daczkowski, C.Gabel, A.D.Mesecar, L.Chang. Structural Basis For the Inhibition of Crispr-CAS12A By Anti-Crispr Proteins. Cell Host Microbe V. 25 815 2019.
ISSN: ESSN 1934-6069
PubMed: 31155345
DOI: 10.1016/J.CHOM.2019.05.004
Page generated: Tue Oct 1 12:46:26 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy