Magnesium in PDB 6ny5: Crystal Structure of the Pum-Hd Domain of S. Pombe PUF1 in Complex with Rna

The structure of Crystal Structure of the Pum-Hd Domain of S. Pombe PUF1 in Complex with Rna, PDB code: 6ny5 was solved by C.Qiu, T.M.T.Hall, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.76 / 3.00
Space group	I 41 2 2
Cell size a, b, c (Å), α, β, γ (°)	159.677, 159.677, 215.530, 90.00, 90.00, 90.00
R / Rfree (%)	21.1 / 26.3

The binding sites of Magnesium atom in the Crystal Structure of the Pum-Hd Domain of S. Pombe PUF1 in Complex with Rna (pdb code 6ny5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Pum-Hd Domain of S. Pombe PUF1 in Complex with Rna, PDB code: 6ny5:

Magnesium binding site 1 out of 1 in the Crystal Structure of the Pum-Hd Domain of S. Pombe PUF1 in Complex with Rna


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Pum-Hd Domain of S. Pombe PUF1 in Complex with Rna within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg101 b:87.3 occ:1.00 OP1 C:A10 2.3 0.8 1.0 O2 C:C7 2.4 0.2 1.0 C2 C:C7 3.5 0.9 1.0 P C:A10 3.6 88.6 1.0 N3 C:C7 3.9 0.7 1.0 O3' C:U9 4.1 91.5 1.0 O5' C:A10 4.1 83.9 1.0 N1 C:A6 4.3 0.3 1.0 N1 C:C7 4.7 0.2 1.0 OP2 C:A10 4.9 90.0 1.0 C2 C:A6 4.9 0.5 1.0 C1' C:C7 5.0 0.3 1.0

C.Qiu, R.C.Dutcher, D.F.Porter, Y.Arava, M.Wickens, T.M.T.Hall. Cooperative Activity of Distinct Rna-Binding Modules Define Recognition Specificity of A Fungal PUF1 Protein To Be Published.