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Magnesium in PDB 6o1e: The Crystal Structure of Human MORC3 Atpase-Cw in Complex with Amppnp

Protein crystallography data

The structure of The Crystal Structure of Human MORC3 Atpase-Cw in Complex with Amppnp, PDB code: 6o1e was solved by B.J.Klein, Y.Zhang, T.G.Kutateladze, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.93 / 2.41
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 119.510, 119.510, 76.880, 90.00, 90.00, 120.00
R / Rfree (%) 17.9 / 23.2

Other elements in 6o1e:

The structure of The Crystal Structure of Human MORC3 Atpase-Cw in Complex with Amppnp also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Crystal Structure of Human MORC3 Atpase-Cw in Complex with Amppnp (pdb code 6o1e). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Crystal Structure of Human MORC3 Atpase-Cw in Complex with Amppnp, PDB code: 6o1e:

Magnesium binding site 1 out of 1 in 6o1e

Go back to Magnesium Binding Sites List in 6o1e
Magnesium binding site 1 out of 1 in the The Crystal Structure of Human MORC3 Atpase-Cw in Complex with Amppnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Crystal Structure of Human MORC3 Atpase-Cw in Complex with Amppnp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg502

b:50.3
occ:1.00
O1G A:ANP503 2.0 56.4 1.0
O A:HOH617 2.1 50.0 1.0
O1A A:ANP503 2.1 50.4 1.0
O A:HOH611 2.1 50.7 1.0
OD1 A:ASN39 2.1 55.1 1.0
O1B A:ANP503 2.1 48.9 1.0
CG A:ASN39 3.1 52.8 1.0
PB A:ANP503 3.2 54.3 1.0
PA A:ANP503 3.2 55.9 1.0
PG A:ANP503 3.3 53.1 1.0
ND2 A:ASN39 3.4 51.2 1.0
O3A A:ANP503 3.5 58.5 1.0
N3B A:ANP503 3.6 63.0 1.0
NZ A:LYS88 3.8 56.9 1.0
O5' A:ANP503 4.1 56.0 1.0
O2G A:ANP503 4.1 57.0 1.0
OE1 A:GLU35 4.2 76.7 1.0
CA A:GLY103 4.2 53.1 1.0
O A:GLU35 4.3 58.0 1.0
O3G A:ANP503 4.3 64.2 1.0
N A:GLY103 4.4 53.3 1.0
O2A A:ANP503 4.5 55.9 1.0
CB A:ASN39 4.5 46.3 1.0
O2B A:ANP503 4.5 68.4 1.0
CA A:GLY98 4.5 66.2 1.0
N A:PHE104 4.7 57.0 1.0
C A:GLY103 4.8 57.7 1.0
CA A:ASN39 4.8 62.3 1.0
N A:ASN39 4.8 56.1 1.0

Reference:

Y.Zhang, B.J.Klein, K.L.Cox, B.Bertulat, A.H.Tencer, M.R.Holden, G.M.Wright, J.Black, M.C.Cardoso, M.G.Poirier, T.G.Kutateladze. Mechanism For Autoinhibition and Activation of the MORC3 Atpase. Proc. Natl. Acad. Sci. V. 116 6111 2019U.S.A..
ISSN: ESSN 1091-6490
PubMed: 30850548
DOI: 10.1073/PNAS.1819524116
Page generated: Tue Oct 1 12:57:09 2024

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