Atomistry » Magnesium » PDB 6o2q-6oim » 6o7c
Atomistry »
  Magnesium »
    PDB 6o2q-6oim »
      6o7c »

Magnesium in PDB 6o7c: Crystal Structure of the Ljcastor Gating Ring in the CA2+ and K+ State

Protein crystallography data

The structure of Crystal Structure of the Ljcastor Gating Ring in the CA2+ and K+ State, PDB code: 6o7c was solved by Y.Jiang, S.Kim, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.71 / 1.85
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 125.569, 125.569, 82.787, 90.00, 90.00, 90.00
R / Rfree (%) 17.3 / 21

Other elements in 6o7c:

The structure of Crystal Structure of the Ljcastor Gating Ring in the CA2+ and K+ State also contains other interesting chemical elements:

Potassium (K) 1 atom
Calcium (Ca) 3 atoms
Sodium (Na) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Ljcastor Gating Ring in the CA2+ and K+ State (pdb code 6o7c). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Ljcastor Gating Ring in the CA2+ and K+ State, PDB code: 6o7c:

Magnesium binding site 1 out of 1 in 6o7c

Go back to Magnesium Binding Sites List in 6o7c
Magnesium binding site 1 out of 1 in the Crystal Structure of the Ljcastor Gating Ring in the CA2+ and K+ State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Ljcastor Gating Ring in the CA2+ and K+ State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1004

b:50.1
occ:1.00
O A:HOH1226 1.9 46.4 1.0
O A:HOH1307 2.0 50.8 1.0
O A:HOH1254 2.1 52.9 1.0
OD1 A:ASP444 2.3 44.6 1.0
O A:HOH1109 2.9 69.5 1.0
CG A:ASP444 3.1 40.0 1.0
OD2 A:ASP444 3.2 40.6 1.0
O A:GLY627 4.0 49.4 1.0
OD1 A:ASP594 4.0 37.1 1.0
OD2 A:ASP594 4.2 36.1 1.0
O A:HOH1306 4.3 53.0 1.0
O A:HOH1175 4.3 55.7 1.0
CG A:ASP594 4.5 37.2 1.0
CB A:ASP444 4.5 35.3 1.0
OE2 A:GLU593 4.7 51.9 1.0
C A:GLY627 4.8 45.2 1.0
OD1 A:ASP591 4.9 43.0 1.0
CA A:GLY627 4.9 41.5 1.0
CA A:ASP444 5.0 34.5 1.0
O A:HOH1273 5.0 55.6 1.0
N A:ASP444 5.0 33.6 1.0
CG A:ASP591 5.0 37.5 1.0

Reference:

S.Kim, W.Zeng, S.Bernard, J.Liao, M.Venkateshwaran, J.M.Ane, Y.Jiang. CA2+-Regulated CA2+Channels with An Rck Gating Ring Control Plant Symbiotic Associations. Nat Commun V. 10 3703 2019.
ISSN: ESSN 2041-1723
PubMed: 31420535
DOI: 10.1038/S41467-019-11698-5
Page generated: Tue Oct 1 13:19:30 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy