Magnesium in PDB 6oew: Structure of A Cytidylyltransferase From Leptospira Borgpetersenii Serovar Hardjo-Bovis (Strain JB197)

The structure of Structure of A Cytidylyltransferase From Leptospira Borgpetersenii Serovar Hardjo-Bovis (Strain JB197), PDB code: 6oew was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.67 / 1.85
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	65.510, 65.510, 261.930, 90.00, 90.00, 90.00
R / Rfree (%)	17.1 / 21.5

The structure of Structure of A Cytidylyltransferase From Leptospira Borgpetersenii Serovar Hardjo-Bovis (Strain JB197) also contains other interesting chemical elements:

Chlorine

(Cl)

2 atoms

The binding sites of Magnesium atom in the Structure of A Cytidylyltransferase From Leptospira Borgpetersenii Serovar Hardjo-Bovis (Strain JB197) (pdb code 6oew). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of A Cytidylyltransferase From Leptospira Borgpetersenii Serovar Hardjo-Bovis (Strain JB197), PDB code: 6oew:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of A Cytidylyltransferase From Leptospira Borgpetersenii Serovar Hardjo-Bovis (Strain JB197)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of A Cytidylyltransferase From Leptospira Borgpetersenii Serovar Hardjo-Bovis (Strain JB197) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg301 b:59.9 occ:1.00 OD2 A:ASP100 1.9 52.0 1.0 O A:HOH416 2.4 43.1 1.0 O A:HOH564 2.4 57.3 1.0 O A:HOH408 2.5 43.8 1.0 CG A:ASP100 2.9 41.1 1.0 OD1 A:ASP100 3.4 41.1 1.0 O A:HOH516 4.0 49.2 1.0 O A:HOH555 4.1 52.0 1.0 CB A:ASP100 4.2 43.8 1.0 OD1 A:ASP194 4.3 42.0 1.0 OG1 A:THR98 4.4 52.0 1.0 OD2 A:ASP194 4.5 43.2 1.0 OG1 A:THR192 4.5 60.4 1.0 CG A:ASP194 4.8 41.9 1.0 O A:HOH420 4.9 50.5 1.0

Magnesium binding site 2 out of 2 in the Structure of A Cytidylyltransferase From Leptospira Borgpetersenii Serovar Hardjo-Bovis (Strain JB197)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of A Cytidylyltransferase From Leptospira Borgpetersenii Serovar Hardjo-Bovis (Strain JB197) within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg301 b:32.3 occ:1.00 O B:HOH579 2.0 39.4 1.0 OD2 B:ASP100 2.1 27.9 1.0 O B:HOH421 2.2 30.6 1.0 O B:HOH439 2.2 33.1 1.0 O B:HOH423 2.2 33.5 1.0 O B:HOH560 2.3 41.0 1.0 CG B:ASP100 3.2 29.2 1.0 OD1 B:ASP100 3.6 29.6 1.0 O B:HOH454 4.0 33.6 1.0 OD2 B:ASP194 4.2 30.7 1.0 OG1 B:THR192 4.3 37.3 1.0 OD1 B:ASP194 4.3 27.4 1.0 O B:HOH502 4.4 35.9 1.0 CB B:ASP100 4.5 27.7 1.0 O B:HOH473 4.5 42.9 1.0 O B:HOH532 4.5 49.3 1.0 CG2 B:THR98 4.6 24.6 1.0 O B:HOH539 4.6 50.9 1.0 O B:HOH501 4.6 43.6 1.0 CG B:ASP194 4.7 29.0 1.0 O B:HOH587 4.9 60.0 1.0

J.Abendroth, D.Fox Iii, D.D.Lorimer, P.S.Horanyi, T.E.Edwards. Structure of A Cytidylyltransferase From Leptospira Borgpetersenii Serovar Hardjo-Bovis (Strain JB197) To Be Published.