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Magnesium in PDB 6oq4: Crystal Structure of the Ternary Complex of KRIT1 Bound to Both the RAP1 Gtpase and HKI1

Protein crystallography data

The structure of Crystal Structure of the Ternary Complex of KRIT1 Bound to Both the RAP1 Gtpase and HKI1, PDB code: 6oq4 was solved by A.R.Gingras, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 58.60 / 1.75
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 57.350, 77.410, 58.620, 90.00, 91.64, 90.00
R / Rfree (%) 22.7 / 26.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Ternary Complex of KRIT1 Bound to Both the RAP1 Gtpase and HKI1 (pdb code 6oq4). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Ternary Complex of KRIT1 Bound to Both the RAP1 Gtpase and HKI1, PDB code: 6oq4:

Magnesium binding site 1 out of 1 in 6oq4

Go back to Magnesium Binding Sites List in 6oq4
Magnesium binding site 1 out of 1 in the Crystal Structure of the Ternary Complex of KRIT1 Bound to Both the RAP1 Gtpase and HKI1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Ternary Complex of KRIT1 Bound to Both the RAP1 Gtpase and HKI1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg200

b:31.9
occ:1.00
O1B B:GNP201 2.0 30.7 1.0
O B:HOH306 2.0 30.3 1.0
OG B:SER17 2.1 28.6 1.0
O1G B:GNP201 2.1 33.3 1.0
OG1 B:THR35 2.1 31.9 1.0
O B:HOH321 2.2 35.3 1.0
CB B:THR35 3.1 34.5 1.0
PB B:GNP201 3.1 32.5 1.0
CB B:SER17 3.2 28.8 1.0
PG B:GNP201 3.3 34.9 1.0
N3B B:GNP201 3.4 31.8 1.0
N B:SER17 3.8 29.1 1.0
OD2 B:ASP57 3.9 36.2 1.0
N B:THR35 3.9 36.0 1.0
OD1 B:ASP57 4.0 34.9 1.0
CA B:SER17 4.0 29.5 1.0
O2G B:GNP201 4.1 33.1 1.0
CA B:THR35 4.1 34.9 1.0
O2A B:GNP201 4.1 33.7 1.0
CG2 B:THR35 4.2 34.8 1.0
O2B B:GNP201 4.2 30.4 1.0
O3A B:GNP201 4.2 31.5 1.0
NH1 A:ARG452 4.3 61.2 1.0
O B:HOH308 4.3 40.5 1.0
CG B:ASP57 4.3 34.4 1.0
O B:THR58 4.3 31.3 1.0
O3G B:GNP201 4.3 33.1 1.0
PA B:GNP201 4.5 35.1 1.0
O1A B:GNP201 4.5 34.1 1.0
O B:ASP33 4.6 43.8 1.0
CB B:LYS16 4.8 30.7 1.0
C B:LYS16 4.9 30.0 1.0
NZ B:LYS16 5.0 31.6 1.0
C B:PRO34 5.0 39.1 1.0
CE B:LYS16 5.0 31.0 1.0

Reference:

A.R.Gingras, A.R.Gingras. N/A N/A.
Page generated: Tue Oct 1 13:31:16 2024

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