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Magnesium in PDB 6oqm: Crystal Structure of the MSH6 Pwwp Domain

Protein crystallography data

The structure of Crystal Structure of the MSH6 Pwwp Domain, PDB code: 6oqm was solved by S.Qin, W.Tempel, C.Bountra, C.H.Arrowsmith, A.M.Edwards, J.Min, Structuralgenomics Consortium, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.38 / 2.20
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 56.421, 56.421, 176.291, 90.00, 90.00, 120.00
R / Rfree (%) 21.7 / 27

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the MSH6 Pwwp Domain (pdb code 6oqm). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the MSH6 Pwwp Domain, PDB code: 6oqm:

Magnesium binding site 1 out of 1 in 6oqm

Go back to Magnesium Binding Sites List in 6oqm
Magnesium binding site 1 out of 1 in the Crystal Structure of the MSH6 Pwwp Domain


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the MSH6 Pwwp Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg202

b:49.1
occ:0.33
O A:HOH301 2.0 45.6 1.0
O A:HOH302 2.2 44.6 1.0
OD1 A:ASP135 3.8 49.2 1.0
OD2 A:ASP135 4.0 45.0 1.0
OD2 A:ASP136 4.0 58.1 1.0
CG A:ASP135 4.2 53.1 1.0
CB A:ASP136 4.3 49.6 1.0
CG A:ASP136 4.4 50.0 1.0
NH2 A:ARG174 4.6 55.0 1.0
N A:ASP136 5.0 47.5 1.0

Reference:

S.Qin, W.Tempel, C.Bountra, C.H.Arrowsmith, A.M.Edwards, J.Min, Structural Genomics Consortium. Crystal Structure of the MSH6 Pwwp Domain To Be Published.
Page generated: Tue Oct 1 13:31:49 2024

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