Magnesium in PDB 6p7m: Cryo-Em Structure of LBCAS12A-Crrna: ACRVA4 (1:2 Complex)

The binding sites of Magnesium atom in the Cryo-Em Structure of LBCAS12A-Crrna: ACRVA4 (1:2 Complex) (pdb code 6p7m). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Cryo-Em Structure of LBCAS12A-Crrna: ACRVA4 (1:2 Complex), PDB code: 6p7m:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Cryo-Em Structure of LBCAS12A-Crrna: ACRVA4 (1:2 Complex)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of LBCAS12A-Crrna: ACRVA4 (1:2 Complex) within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg101 b:35.6 occ:1.00 OP2 B:A17 2.0 66.0 1.0 O A:THR716 2.4 66.0 1.0 P B:A17 3.4 66.0 1.0 C A:THR716 3.6 66.0 1.0 O5' B:A17 3.8 66.0 1.0 N A:THR716 4.1 66.0 1.0 OP2 B:U16 4.3 66.0 1.0 CA A:THR716 4.4 66.0 1.0 O3' B:U16 4.4 66.0 1.0 C3' B:U16 4.4 66.0 1.0 OP2 B:G18 4.4 66.0 1.0 OP1 B:A17 4.4 66.0 1.0 OD1 A:ASP708 4.5 66.0 1.0 C8 B:A17 4.6 66.0 1.0 N A:PRO717 4.6 66.0 1.0 N7 B:A17 4.6 66.0 1.0 OP1 B:U16 4.6 66.0 1.0 O5' B:U16 4.6 66.0 1.0 C A:PRO717 4.7 66.0 1.0 CA A:PRO717 4.7 66.0 1.0 P B:U16 4.7 66.0 1.0 C A:GLY715 4.8 66.0 1.0 CB A:THR716 4.8 66.0 1.0 O A:PRO717 4.9 66.0 1.0 N A:ASN718 4.9 66.0 1.0

Magnesium binding site 2 out of 2 in the Cryo-Em Structure of LBCAS12A-Crrna: ACRVA4 (1:2 Complex)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryo-Em Structure of LBCAS12A-Crrna: ACRVA4 (1:2 Complex) within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg102 b:46.0 occ:1.00 OP2 B:A8 3.7 66.0 1.0 O4 B:U3 3.7 66.0 1.0 OP2 B:U7 4.4 66.0 1.0 N7 B:A8 4.5 66.0 1.0 OP2 B:A2 4.6 66.0 1.0 C5 B:C9 4.6 66.0 1.0 C4 B:U3 4.9 66.0 1.0 C8 B:A8 5.0 66.0 1.0

G.J.Knott, B.F.Cress, J.J.Liu, B.W.Thornton, R.J.Lew, B.Al-Shayeb, D.J.Rosenberg, M.Hammel, B.A.Adler, M.J.Lobba, M.Xu, A.P.Arkin, C.Fellmann, J.A.Doudna. Structural Basis For ACRVA4 Inhibition of Specific Crispr-CAS12A. Elife V. 8 2019.
ISSN: ESSN 2050-084X
PubMed: 31397669
DOI: 10.7554/ELIFE.49110