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Magnesium in PDB 6p8v: Structure of E. Coli MS115-1 Horma:Cdnc:PCH2 Complex

Protein crystallography data

The structure of Structure of E. Coli MS115-1 Horma:Cdnc:PCH2 Complex, PDB code: 6p8v was solved by Q.Ye, K.D.Corbett, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 88.88 / 2.64
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 89.789, 138.516, 100.212, 90.00, 98.18, 90.00
R / Rfree (%) 23.3 / 27.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of E. Coli MS115-1 Horma:Cdnc:PCH2 Complex (pdb code 6p8v). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of E. Coli MS115-1 Horma:Cdnc:PCH2 Complex, PDB code: 6p8v:

Magnesium binding site 1 out of 1 in 6p8v

Go back to Magnesium Binding Sites List in 6p8v
Magnesium binding site 1 out of 1 in the Structure of E. Coli MS115-1 Horma:Cdnc:PCH2 Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of E. Coli MS115-1 Horma:Cdnc:PCH2 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Mg402

b:53.7
occ:1.00
OD2 G:ASP74 1.8 87.7 1.0
O2G G:ATP401 1.8 62.7 1.0
O2B G:ATP401 2.1 52.1 1.0
CG G:ASP74 2.9 79.8 1.0
PG G:ATP401 3.2 65.7 1.0
PB G:ATP401 3.3 44.1 1.0
OD1 G:ASP74 3.5 0.5 1.0
O3B G:ATP401 3.7 62.8 1.0
O1G G:ATP401 3.9 56.1 1.0
OG G:SER60 4.0 69.1 1.0
O1B G:ATP401 4.0 44.1 1.0
CB G:ASP74 4.1 74.9 1.0
N G:SER60 4.2 54.3 1.0
CD1 G:LEU70 4.2 58.2 1.0
O G:ASP72 4.3 49.9 1.0
O3G G:ATP401 4.4 47.0 1.0
CA G:GLY59 4.4 45.0 1.0
OD1 G:ASN71 4.4 55.4 1.0
O2A G:ATP401 4.5 61.3 1.0
O3A G:ATP401 4.6 70.6 1.0
CB G:SER60 4.8 62.2 1.0
C G:GLY59 4.9 45.1 1.0

Reference:

Q.Ye, R.K.Lau, I.T.Mathews, E.A.Birkholz, J.D.Watrous, C.S.Azimi, J.Pogliano, M.Jain, K.D.Corbett. Horma Domain Proteins and A TRIP13-Like Atpase Regulate Bacterial Cgas-Like Enzymes to Mediate Bacteriophage Immunity To Be Published.
Page generated: Tue Oct 1 13:59:37 2024

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