Magnesium in PDB 6pnj: Structure of Photosystem I Acclimated to Far-Red Light
Enzymatic activity of Structure of Photosystem I Acclimated to Far-Red Light
All present enzymatic activity of Structure of Photosystem I Acclimated to Far-Red Light:
1.97.1.12;
Other elements in 6pnj:
The structure of Structure of Photosystem I Acclimated to Far-Red Light also contains other interesting chemical elements:
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
40;
Page 5, Binding sites: 41 -
50;
Page 6, Binding sites: 51 -
60;
Page 7, Binding sites: 61 -
70;
Page 8, Binding sites: 71 -
80;
Page 9, Binding sites: 81 -
90;
Page 10, Binding sites: 91 -
100;
Page 11, Binding sites: 101 -
110;
Page 12, Binding sites: 111 -
120;
Page 13, Binding sites: 121 -
130;
Page 14, Binding sites: 131 -
140;
Page 15, Binding sites: 141 -
150;
Page 16, Binding sites: 151 -
160;
Page 17, Binding sites: 161 -
170;
Page 18, Binding sites: 171 -
180;
Page 19, Binding sites: 181 -
190;
Page 20, Binding sites: 191 -
200;
Page 21, Binding sites: 201 -
210;
Page 22, Binding sites: 211 -
220;
Page 23, Binding sites: 221 -
230;
Page 24, Binding sites: 231 -
240;
Page 25, Binding sites: 241 -
250;
Page 26, Binding sites: 251 -
260;
Page 27, Binding sites: 261 -
267;
Binding sites:
The binding sites of Magnesium atom in the Structure of Photosystem I Acclimated to Far-Red Light
(pdb code 6pnj). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 267 binding sites of Magnesium where determined in the
Structure of Photosystem I Acclimated to Far-Red Light, PDB code: 6pnj:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 267 in 6pnj
Go back to
Magnesium Binding Sites List in 6pnj
Magnesium binding site 1 out
of 267 in the Structure of Photosystem I Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Structure of Photosystem I Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg801
b:6.6
occ:1.00
|
MG
|
A:CL0801
|
0.0
|
6.6
|
1.0
|
ND
|
A:CL0801
|
2.0
|
6.6
|
1.0
|
NB
|
A:CL0801
|
2.1
|
6.6
|
1.0
|
NC
|
A:CL0801
|
2.1
|
6.6
|
1.0
|
NA
|
A:CL0801
|
2.2
|
6.6
|
1.0
|
C4D
|
A:CL0801
|
2.9
|
6.6
|
1.0
|
C4B
|
A:CL0801
|
3.0
|
6.6
|
1.0
|
NE2
|
A:HIS713
|
3.0
|
8.8
|
1.0
|
C1B
|
A:CL0801
|
3.1
|
6.6
|
1.0
|
C1C
|
A:CL0801
|
3.1
|
6.6
|
1.0
|
C1D
|
A:CL0801
|
3.1
|
6.6
|
1.0
|
C4A
|
A:CL0801
|
3.1
|
6.6
|
1.0
|
C4C
|
A:CL0801
|
3.1
|
6.6
|
1.0
|
C1A
|
A:CL0801
|
3.2
|
6.6
|
1.0
|
CHC
|
A:CL0801
|
3.4
|
6.6
|
1.0
|
CHB
|
A:CL0801
|
3.4
|
6.6
|
1.0
|
CHA
|
A:CL0801
|
3.5
|
6.6
|
1.0
|
CHD
|
A:CL0801
|
3.5
|
6.6
|
1.0
|
CD2
|
A:HIS713
|
3.6
|
8.8
|
1.0
|
CAB
|
B:CLA803
|
3.8
|
21.2
|
1.0
|
C3B
|
B:CLA803
|
3.9
|
21.2
|
1.0
|
C4B
|
B:CLA803
|
4.1
|
21.2
|
1.0
|
CHC
|
B:CLA803
|
4.1
|
21.2
|
1.0
|
C3D
|
A:CL0801
|
4.1
|
6.6
|
1.0
|
CE1
|
A:HIS713
|
4.1
|
8.8
|
1.0
|
C3B
|
A:CL0801
|
4.3
|
6.6
|
1.0
|
C2D
|
A:CL0801
|
4.3
|
6.6
|
1.0
|
C2B
|
A:CL0801
|
4.4
|
6.6
|
1.0
|
C3C
|
A:CL0801
|
4.4
|
6.6
|
1.0
|
C2C
|
A:CL0801
|
4.4
|
6.6
|
1.0
|
C3A
|
A:CL0801
|
4.4
|
6.6
|
1.0
|
C2A
|
A:CL0801
|
4.5
|
6.6
|
1.0
|
CBB
|
B:CLA803
|
4.6
|
21.2
|
1.0
|
C2B
|
B:CLA803
|
4.6
|
21.2
|
1.0
|
NB
|
B:CLA803
|
4.8
|
21.2
|
1.0
|
C1C
|
B:CLA803
|
4.9
|
21.2
|
1.0
|
CG
|
A:HIS713
|
4.9
|
8.8
|
1.0
|
CZ
|
B:PHE627
|
4.9
|
11.6
|
1.0
|
CBD
|
A:CL0801
|
5.0
|
6.6
|
1.0
|
|
Magnesium binding site 2 out
of 267 in 6pnj
Go back to
Magnesium Binding Sites List in 6pnj
Magnesium binding site 2 out
of 267 in the Structure of Photosystem I Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Structure of Photosystem I Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg802
b:3.9
occ:1.00
|
MG
|
A:CLA802
|
0.0
|
3.9
|
1.0
|
ND
|
A:CLA802
|
2.0
|
3.9
|
1.0
|
NB
|
A:CLA802
|
2.0
|
3.9
|
1.0
|
NC
|
A:CLA802
|
2.1
|
3.9
|
1.0
|
NA
|
A:CLA802
|
2.2
|
3.9
|
1.0
|
C4D
|
A:CLA802
|
2.9
|
3.9
|
1.0
|
C4B
|
A:CLA802
|
3.0
|
3.9
|
1.0
|
C1B
|
A:CLA802
|
3.0
|
3.9
|
1.0
|
C1C
|
A:CLA802
|
3.1
|
3.9
|
1.0
|
C1D
|
A:CLA802
|
3.1
|
3.9
|
1.0
|
C4C
|
A:CLA802
|
3.1
|
3.9
|
1.0
|
C4A
|
A:CLA802
|
3.1
|
3.9
|
1.0
|
C1A
|
A:CLA802
|
3.2
|
3.9
|
1.0
|
CHC
|
A:CLA802
|
3.4
|
3.9
|
1.0
|
CHB
|
A:CLA802
|
3.4
|
3.9
|
1.0
|
CHA
|
A:CLA802
|
3.4
|
3.9
|
1.0
|
CHD
|
A:CLA802
|
3.5
|
3.9
|
1.0
|
CBB
|
B:CLA804
|
3.6
|
5.2
|
1.0
|
C3D
|
A:CLA802
|
4.1
|
3.9
|
1.0
|
CB
|
B:ALA665
|
4.3
|
5.3
|
1.0
|
C3B
|
A:CLA802
|
4.3
|
3.9
|
1.0
|
C2D
|
A:CLA802
|
4.3
|
3.9
|
1.0
|
CAB
|
B:CLA804
|
4.3
|
5.2
|
1.0
|
C2B
|
A:CLA802
|
4.3
|
3.9
|
1.0
|
OD1
|
A:ASN637
|
4.4
|
9.4
|
1.0
|
C2C
|
A:CLA802
|
4.4
|
3.9
|
1.0
|
C3C
|
A:CLA802
|
4.4
|
3.9
|
1.0
|
C3A
|
A:CLA802
|
4.5
|
3.9
|
1.0
|
C2A
|
A:CLA802
|
4.5
|
3.9
|
1.0
|
CHC
|
B:CLA804
|
4.8
|
5.2
|
1.0
|
CBD
|
A:CLA802
|
4.9
|
3.9
|
1.0
|
C3B
|
B:CLA804
|
5.0
|
5.2
|
1.0
|
C2
|
A:CL0801
|
5.0
|
6.6
|
1.0
|
|
Magnesium binding site 3 out
of 267 in 6pnj
Go back to
Magnesium Binding Sites List in 6pnj
Magnesium binding site 3 out
of 267 in the Structure of Photosystem I Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Structure of Photosystem I Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg803
b:7.4
occ:1.00
|
MG
|
A:CLA803
|
0.0
|
7.4
|
1.0
|
ND
|
A:CLA803
|
2.0
|
7.4
|
1.0
|
NB
|
A:CLA803
|
2.0
|
7.4
|
1.0
|
NC
|
A:CLA803
|
2.1
|
7.4
|
1.0
|
NA
|
A:CLA803
|
2.2
|
7.4
|
1.0
|
C4D
|
A:CLA803
|
2.9
|
7.4
|
1.0
|
C1B
|
A:CLA803
|
3.0
|
7.4
|
1.0
|
C4B
|
A:CLA803
|
3.0
|
7.4
|
1.0
|
C1D
|
A:CLA803
|
3.1
|
7.4
|
1.0
|
C1C
|
A:CLA803
|
3.1
|
7.4
|
1.0
|
C4A
|
A:CLA803
|
3.1
|
7.4
|
1.0
|
C4C
|
A:CLA803
|
3.1
|
7.4
|
1.0
|
C1A
|
A:CLA803
|
3.2
|
7.4
|
1.0
|
CHC
|
A:CLA803
|
3.4
|
7.4
|
1.0
|
CHB
|
A:CLA803
|
3.4
|
7.4
|
1.0
|
SD
|
A:MET721
|
3.4
|
7.3
|
1.0
|
CHD
|
A:CLA803
|
3.5
|
7.4
|
1.0
|
CZ2
|
B:TRP589
|
3.5
|
4.5
|
1.0
|
CHA
|
A:CLA803
|
3.5
|
7.4
|
1.0
|
NE1
|
B:TRP589
|
3.8
|
4.5
|
1.0
|
CE2
|
B:TRP589
|
4.0
|
4.5
|
1.0
|
CG
|
A:MET721
|
4.0
|
7.3
|
1.0
|
C3D
|
A:CLA803
|
4.2
|
7.4
|
1.0
|
C2D
|
A:CLA803
|
4.3
|
7.4
|
1.0
|
C3B
|
A:CLA803
|
4.3
|
7.4
|
1.0
|
CB
|
A:MET721
|
4.3
|
7.3
|
1.0
|
C2B
|
A:CLA803
|
4.3
|
7.4
|
1.0
|
C2C
|
A:CLA803
|
4.4
|
7.4
|
1.0
|
C3C
|
A:CLA803
|
4.4
|
7.4
|
1.0
|
C3A
|
A:CLA803
|
4.4
|
7.4
|
1.0
|
CE
|
A:MET721
|
4.4
|
7.3
|
1.0
|
C2A
|
A:CLA803
|
4.5
|
7.4
|
1.0
|
CH2
|
B:TRP589
|
4.6
|
4.5
|
1.0
|
CBD
|
A:CLA803
|
5.0
|
7.4
|
1.0
|
CMC
|
A:CLA850
|
5.0
|
8.9
|
1.0
|
|
Magnesium binding site 4 out
of 267 in 6pnj
Go back to
Magnesium Binding Sites List in 6pnj
Magnesium binding site 4 out
of 267 in the Structure of Photosystem I Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Structure of Photosystem I Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg804
b:29.6
occ:1.00
|
MG
|
A:CLA804
|
0.0
|
29.6
|
1.0
|
ND
|
A:CLA804
|
2.0
|
29.6
|
1.0
|
NB
|
A:CLA804
|
2.1
|
29.6
|
1.0
|
NC
|
A:CLA804
|
2.1
|
29.6
|
1.0
|
NA
|
A:CLA804
|
2.2
|
29.6
|
1.0
|
C4D
|
A:CLA804
|
2.9
|
29.6
|
1.0
|
C4B
|
A:CLA804
|
3.0
|
29.6
|
1.0
|
C1B
|
A:CLA804
|
3.1
|
29.6
|
1.0
|
C1C
|
A:CLA804
|
3.1
|
29.6
|
1.0
|
C1D
|
A:CLA804
|
3.1
|
29.6
|
1.0
|
NE2
|
A:HIS51
|
3.1
|
17.6
|
1.0
|
C4A
|
A:CLA804
|
3.1
|
29.6
|
1.0
|
C4C
|
A:CLA804
|
3.2
|
29.6
|
1.0
|
C1A
|
A:CLA804
|
3.2
|
29.6
|
1.0
|
CHC
|
A:CLA804
|
3.4
|
29.6
|
1.0
|
CHB
|
A:CLA804
|
3.4
|
29.6
|
1.0
|
CHA
|
A:CLA804
|
3.5
|
29.6
|
1.0
|
CHD
|
A:CLA804
|
3.5
|
29.6
|
1.0
|
CB
|
J:PRO14
|
3.6
|
35.8
|
1.0
|
CG
|
J:PRO14
|
3.8
|
35.8
|
1.0
|
CE1
|
A:HIS51
|
3.9
|
17.6
|
1.0
|
CD2
|
A:HIS51
|
4.0
|
17.6
|
1.0
|
C3D
|
A:CLA804
|
4.1
|
29.6
|
1.0
|
C3B
|
A:CLA804
|
4.3
|
29.6
|
1.0
|
C2D
|
A:CLA804
|
4.4
|
29.6
|
1.0
|
C2B
|
A:CLA804
|
4.4
|
29.6
|
1.0
|
C2C
|
A:CLA804
|
4.4
|
29.6
|
1.0
|
C3C
|
A:CLA804
|
4.4
|
29.6
|
1.0
|
C39
|
J:BCR102
|
4.5
|
45.9
|
1.0
|
C3A
|
A:CLA804
|
4.5
|
29.6
|
1.0
|
C2A
|
A:CLA804
|
4.5
|
29.6
|
1.0
|
C29
|
J:BCR102
|
4.7
|
45.9
|
1.0
|
CD
|
J:PRO14
|
4.8
|
35.8
|
1.0
|
ND1
|
A:HIS51
|
4.9
|
17.6
|
1.0
|
CBD
|
A:CLA804
|
5.0
|
29.6
|
1.0
|
|
Magnesium binding site 5 out
of 267 in 6pnj
Go back to
Magnesium Binding Sites List in 6pnj
Magnesium binding site 5 out
of 267 in the Structure of Photosystem I Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Structure of Photosystem I Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg805
b:21.9
occ:1.00
|
MG
|
A:CLA805
|
0.0
|
21.9
|
1.0
|
ND
|
A:CLA805
|
2.0
|
21.9
|
1.0
|
NB
|
A:CLA805
|
2.1
|
21.9
|
1.0
|
NC
|
A:CLA805
|
2.1
|
21.9
|
1.0
|
NA
|
A:CLA805
|
2.2
|
21.9
|
1.0
|
C4D
|
A:CLA805
|
2.9
|
21.9
|
1.0
|
NE2
|
A:HIS55
|
3.0
|
16.8
|
1.0
|
C4B
|
A:CLA805
|
3.0
|
21.9
|
1.0
|
C1B
|
A:CLA805
|
3.1
|
21.9
|
1.0
|
C1C
|
A:CLA805
|
3.1
|
21.9
|
1.0
|
C1D
|
A:CLA805
|
3.1
|
21.9
|
1.0
|
C4A
|
A:CLA805
|
3.1
|
21.9
|
1.0
|
C4C
|
A:CLA805
|
3.2
|
21.9
|
1.0
|
C1A
|
A:CLA805
|
3.2
|
21.9
|
1.0
|
CHC
|
A:CLA805
|
3.4
|
21.9
|
1.0
|
CHB
|
A:CLA805
|
3.4
|
21.9
|
1.0
|
CHA
|
A:CLA805
|
3.5
|
21.9
|
1.0
|
CHD
|
A:CLA805
|
3.5
|
21.9
|
1.0
|
C4
|
A:CLA805
|
3.5
|
21.9
|
1.0
|
CE1
|
A:HIS55
|
3.9
|
16.8
|
1.0
|
CD2
|
A:HIS55
|
4.0
|
16.8
|
1.0
|
C3D
|
A:CLA805
|
4.1
|
21.9
|
1.0
|
C3B
|
A:CLA805
|
4.3
|
21.9
|
1.0
|
C2D
|
A:CLA805
|
4.3
|
21.9
|
1.0
|
C3
|
A:CLA805
|
4.4
|
21.9
|
1.0
|
C2B
|
A:CLA805
|
4.4
|
21.9
|
1.0
|
C2C
|
A:CLA805
|
4.4
|
21.9
|
1.0
|
C3C
|
A:CLA805
|
4.4
|
21.9
|
1.0
|
C3A
|
A:CLA805
|
4.5
|
21.9
|
1.0
|
C2A
|
A:CLA805
|
4.5
|
21.9
|
1.0
|
C6
|
A:CLA805
|
4.7
|
21.9
|
1.0
|
C7
|
A:CLA805
|
4.8
|
21.9
|
1.0
|
C2
|
A:CLA805
|
4.9
|
21.9
|
1.0
|
CBD
|
A:CLA805
|
4.9
|
21.9
|
1.0
|
|
Magnesium binding site 6 out
of 267 in 6pnj
Go back to
Magnesium Binding Sites List in 6pnj
Magnesium binding site 6 out
of 267 in the Structure of Photosystem I Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Structure of Photosystem I Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg806
b:14.1
occ:1.00
|
MG
|
A:CLA806
|
0.0
|
14.1
|
1.0
|
ND
|
A:CLA806
|
2.0
|
14.1
|
1.0
|
NB
|
A:CLA806
|
2.1
|
14.1
|
1.0
|
NC
|
A:CLA806
|
2.1
|
14.1
|
1.0
|
NA
|
A:CLA806
|
2.2
|
14.1
|
1.0
|
C4D
|
A:CLA806
|
2.9
|
14.1
|
1.0
|
C4B
|
A:CLA806
|
3.0
|
14.1
|
1.0
|
NE2
|
A:HIS75
|
3.0
|
12.3
|
1.0
|
C1C
|
A:CLA806
|
3.1
|
14.1
|
1.0
|
C1B
|
A:CLA806
|
3.1
|
14.1
|
1.0
|
C1D
|
A:CLA806
|
3.1
|
14.1
|
1.0
|
C4A
|
A:CLA806
|
3.1
|
14.1
|
1.0
|
C4C
|
A:CLA806
|
3.1
|
14.1
|
1.0
|
C1A
|
A:CLA806
|
3.2
|
14.1
|
1.0
|
CMB
|
A:CLA831
|
3.3
|
12.2
|
1.0
|
CHC
|
A:CLA806
|
3.4
|
14.1
|
1.0
|
CHB
|
A:CLA806
|
3.4
|
14.1
|
1.0
|
CHA
|
A:CLA806
|
3.5
|
14.1
|
1.0
|
CD2
|
A:HIS75
|
3.5
|
12.3
|
1.0
|
CHD
|
A:CLA806
|
3.6
|
14.1
|
1.0
|
CE1
|
A:HIS75
|
4.1
|
12.3
|
1.0
|
C3D
|
A:CLA806
|
4.1
|
14.1
|
1.0
|
C3B
|
A:CLA806
|
4.3
|
14.1
|
1.0
|
C2D
|
A:CLA806
|
4.4
|
14.1
|
1.0
|
C2C
|
A:CLA806
|
4.4
|
14.1
|
1.0
|
C2B
|
A:CLA806
|
4.4
|
14.1
|
1.0
|
C3C
|
A:CLA806
|
4.4
|
14.1
|
1.0
|
C3A
|
A:CLA806
|
4.4
|
14.1
|
1.0
|
CBB
|
A:CLA831
|
4.5
|
12.2
|
1.0
|
C2A
|
A:CLA806
|
4.5
|
14.1
|
1.0
|
C2B
|
A:CLA831
|
4.6
|
12.2
|
1.0
|
CG2
|
A:ILE71
|
4.7
|
17.4
|
1.0
|
CG
|
A:HIS75
|
4.7
|
12.3
|
1.0
|
CBD
|
A:CLA806
|
4.9
|
14.1
|
1.0
|
ND1
|
A:HIS75
|
5.0
|
12.3
|
1.0
|
|
Magnesium binding site 7 out
of 267 in 6pnj
Go back to
Magnesium Binding Sites List in 6pnj
Magnesium binding site 7 out
of 267 in the Structure of Photosystem I Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Structure of Photosystem I Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg807
b:12.4
occ:1.00
|
MG
|
A:CLA807
|
0.0
|
12.4
|
1.0
|
ND
|
A:CLA807
|
2.0
|
12.4
|
1.0
|
NB
|
A:CLA807
|
2.1
|
12.4
|
1.0
|
NC
|
A:CLA807
|
2.1
|
12.4
|
1.0
|
NA
|
A:CLA807
|
2.2
|
12.4
|
1.0
|
C4D
|
A:CLA807
|
2.9
|
12.4
|
1.0
|
C4B
|
A:CLA807
|
3.0
|
12.4
|
1.0
|
NE2
|
A:HIS78
|
3.0
|
11.4
|
1.0
|
C1B
|
A:CLA807
|
3.1
|
12.4
|
1.0
|
C1C
|
A:CLA807
|
3.1
|
12.4
|
1.0
|
C1D
|
A:CLA807
|
3.1
|
12.4
|
1.0
|
C4A
|
A:CLA807
|
3.1
|
12.4
|
1.0
|
C4C
|
A:CLA807
|
3.1
|
12.4
|
1.0
|
C1A
|
A:CLA807
|
3.2
|
12.4
|
1.0
|
CHC
|
A:CLA807
|
3.4
|
12.4
|
1.0
|
CHB
|
A:CLA807
|
3.4
|
12.4
|
1.0
|
CHA
|
A:CLA807
|
3.5
|
12.4
|
1.0
|
CHD
|
A:CLA807
|
3.5
|
12.4
|
1.0
|
C16
|
A:CLA807
|
3.6
|
12.4
|
1.0
|
CD2
|
A:HIS78
|
3.9
|
11.4
|
1.0
|
CE1
|
A:HIS78
|
4.0
|
11.4
|
1.0
|
C17
|
A:CLA807
|
4.1
|
12.4
|
1.0
|
C3D
|
A:CLA807
|
4.1
|
12.4
|
1.0
|
C18
|
A:CLA807
|
4.2
|
12.4
|
1.0
|
C3B
|
A:CLA807
|
4.3
|
12.4
|
1.0
|
C2D
|
A:CLA807
|
4.4
|
12.4
|
1.0
|
C2B
|
A:CLA807
|
4.4
|
12.4
|
1.0
|
C3C
|
A:CLA807
|
4.4
|
12.4
|
1.0
|
C2C
|
A:CLA807
|
4.4
|
12.4
|
1.0
|
C3A
|
A:CLA807
|
4.4
|
12.4
|
1.0
|
C2A
|
A:CLA807
|
4.5
|
12.4
|
1.0
|
CMA
|
A:CLA806
|
4.9
|
14.1
|
1.0
|
C15
|
A:CLA807
|
4.9
|
12.4
|
1.0
|
CBD
|
A:CLA807
|
5.0
|
12.4
|
1.0
|
C19
|
A:CLA807
|
5.0
|
12.4
|
1.0
|
|
Magnesium binding site 8 out
of 267 in 6pnj
Go back to
Magnesium Binding Sites List in 6pnj
Magnesium binding site 8 out
of 267 in the Structure of Photosystem I Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Structure of Photosystem I Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg808
b:23.0
occ:1.00
|
MG
|
A:CLA808
|
0.0
|
23.0
|
1.0
|
ND
|
A:CLA808
|
2.0
|
23.0
|
1.0
|
NB
|
A:CLA808
|
2.1
|
23.0
|
1.0
|
NC
|
A:CLA808
|
2.1
|
23.0
|
1.0
|
NA
|
A:CLA808
|
2.2
|
23.0
|
1.0
|
C4D
|
A:CLA808
|
2.9
|
23.0
|
1.0
|
C4B
|
A:CLA808
|
3.0
|
23.0
|
1.0
|
C1B
|
A:CLA808
|
3.1
|
23.0
|
1.0
|
C1C
|
A:CLA808
|
3.1
|
23.0
|
1.0
|
NE2
|
A:HIS92
|
3.1
|
20.6
|
1.0
|
C1D
|
A:CLA808
|
3.1
|
23.0
|
1.0
|
C4A
|
A:CLA808
|
3.2
|
23.0
|
1.0
|
C4C
|
A:CLA808
|
3.2
|
23.0
|
1.0
|
C1A
|
A:CLA808
|
3.2
|
23.0
|
1.0
|
CHC
|
A:CLA808
|
3.4
|
23.0
|
1.0
|
CHB
|
A:CLA808
|
3.4
|
23.0
|
1.0
|
CHA
|
A:CLA808
|
3.5
|
23.0
|
1.0
|
CHD
|
A:CLA808
|
3.5
|
23.0
|
1.0
|
CE1
|
A:HIS92
|
4.0
|
20.6
|
1.0
|
CD2
|
A:HIS92
|
4.0
|
20.6
|
1.0
|
C3D
|
A:CLA808
|
4.1
|
23.0
|
1.0
|
C3B
|
A:CLA808
|
4.3
|
23.0
|
1.0
|
C2D
|
A:CLA808
|
4.4
|
23.0
|
1.0
|
C2B
|
A:CLA808
|
4.4
|
23.0
|
1.0
|
C2C
|
A:CLA808
|
4.4
|
23.0
|
1.0
|
C3C
|
A:CLA808
|
4.4
|
23.0
|
1.0
|
C3A
|
A:CLA808
|
4.5
|
23.0
|
1.0
|
C2A
|
A:CLA808
|
4.5
|
23.0
|
1.0
|
CBD
|
A:CLA808
|
5.0
|
23.0
|
1.0
|
|
Magnesium binding site 9 out
of 267 in 6pnj
Go back to
Magnesium Binding Sites List in 6pnj
Magnesium binding site 9 out
of 267 in the Structure of Photosystem I Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Structure of Photosystem I Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg809
b:15.8
occ:1.00
|
MG
|
A:CLA809
|
0.0
|
15.8
|
1.0
|
ND
|
A:CLA809
|
2.0
|
15.8
|
1.0
|
NB
|
A:CLA809
|
2.1
|
15.8
|
1.0
|
NC
|
A:CLA809
|
2.1
|
15.8
|
1.0
|
NA
|
A:CLA809
|
2.2
|
15.8
|
1.0
|
C4D
|
A:CLA809
|
2.9
|
15.8
|
1.0
|
C4B
|
A:CLA809
|
3.0
|
15.8
|
1.0
|
C1B
|
A:CLA809
|
3.1
|
15.8
|
1.0
|
C1C
|
A:CLA809
|
3.1
|
15.8
|
1.0
|
C1D
|
A:CLA809
|
3.1
|
15.8
|
1.0
|
C4A
|
A:CLA809
|
3.1
|
15.8
|
1.0
|
C4C
|
A:CLA809
|
3.2
|
15.8
|
1.0
|
C1A
|
A:CLA809
|
3.2
|
15.8
|
1.0
|
CHC
|
A:CLA809
|
3.4
|
15.8
|
1.0
|
CHB
|
A:CLA809
|
3.4
|
15.8
|
1.0
|
CHA
|
A:CLA809
|
3.5
|
15.8
|
1.0
|
CHD
|
A:CLA809
|
3.5
|
15.8
|
1.0
|
OE1
|
A:GLN114
|
3.7
|
20.8
|
1.0
|
CD
|
A:GLN114
|
3.8
|
20.8
|
1.0
|
NE2
|
A:GLN114
|
4.0
|
20.8
|
1.0
|
O2A
|
A:CLA829
|
4.1
|
12.2
|
1.0
|
C3D
|
A:CLA809
|
4.1
|
15.8
|
1.0
|
C1
|
A:CLA829
|
4.2
|
12.2
|
1.0
|
C2
|
A:CLA829
|
4.3
|
12.2
|
1.0
|
C3B
|
A:CLA809
|
4.3
|
15.8
|
1.0
|
CG
|
A:GLN114
|
4.3
|
20.8
|
1.0
|
C2D
|
A:CLA809
|
4.4
|
15.8
|
1.0
|
C2B
|
A:CLA809
|
4.4
|
15.8
|
1.0
|
C3
|
A:CLA829
|
4.4
|
12.2
|
1.0
|
C2C
|
A:CLA809
|
4.4
|
15.8
|
1.0
|
C3C
|
A:CLA809
|
4.4
|
15.8
|
1.0
|
C3A
|
A:CLA809
|
4.5
|
15.8
|
1.0
|
C5
|
A:CLA829
|
4.5
|
12.2
|
1.0
|
C2A
|
A:CLA809
|
4.5
|
15.8
|
1.0
|
CBD
|
A:CLA809
|
5.0
|
15.8
|
1.0
|
|
Magnesium binding site 10 out
of 267 in 6pnj
Go back to
Magnesium Binding Sites List in 6pnj
Magnesium binding site 10 out
of 267 in the Structure of Photosystem I Acclimated to Far-Red Light
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Structure of Photosystem I Acclimated to Far-Red Light within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg810
b:24.6
occ:1.00
|
MG
|
A:CLA810
|
0.0
|
24.6
|
1.0
|
ND
|
A:CLA810
|
2.0
|
24.6
|
1.0
|
NB
|
A:CLA810
|
2.0
|
24.6
|
1.0
|
NC
|
A:CLA810
|
2.1
|
24.6
|
1.0
|
NA
|
A:CLA810
|
2.2
|
24.6
|
1.0
|
C4D
|
A:CLA810
|
2.9
|
24.6
|
1.0
|
C4B
|
A:CLA810
|
3.0
|
24.6
|
1.0
|
C1B
|
A:CLA810
|
3.1
|
24.6
|
1.0
|
OE1
|
A:GLN122
|
3.1
|
27.8
|
1.0
|
C1C
|
A:CLA810
|
3.1
|
24.6
|
1.0
|
C1D
|
A:CLA810
|
3.1
|
24.6
|
1.0
|
C4A
|
A:CLA810
|
3.1
|
24.6
|
1.0
|
C4C
|
A:CLA810
|
3.2
|
24.6
|
1.0
|
C1A
|
A:CLA810
|
3.2
|
24.6
|
1.0
|
CHC
|
A:CLA810
|
3.4
|
24.6
|
1.0
|
CHB
|
A:CLA810
|
3.4
|
24.6
|
1.0
|
CHA
|
A:CLA810
|
3.5
|
24.6
|
1.0
|
CHD
|
A:CLA810
|
3.5
|
24.6
|
1.0
|
CD
|
A:GLN122
|
3.6
|
27.8
|
1.0
|
NE2
|
A:GLN122
|
3.6
|
27.8
|
1.0
|
C15
|
A:CLA829
|
3.7
|
12.2
|
1.0
|
C3D
|
A:CLA810
|
4.1
|
24.6
|
1.0
|
C13
|
A:CLA829
|
4.2
|
12.2
|
1.0
|
C3B
|
A:CLA810
|
4.3
|
24.6
|
1.0
|
C2D
|
A:CLA810
|
4.3
|
24.6
|
1.0
|
C2B
|
A:CLA810
|
4.4
|
24.6
|
1.0
|
C2C
|
A:CLA810
|
4.4
|
24.6
|
1.0
|
C3C
|
A:CLA810
|
4.4
|
24.6
|
1.0
|
C3A
|
A:CLA810
|
4.5
|
24.6
|
1.0
|
C2A
|
A:CLA810
|
4.5
|
24.6
|
1.0
|
CG
|
A:GLN122
|
4.9
|
27.8
|
1.0
|
C14
|
A:CLA829
|
4.9
|
12.2
|
1.0
|
CBD
|
A:CLA810
|
4.9
|
24.6
|
1.0
|
|
Reference:
C.Gisriel,
G.Shen,
V.Kurashov,
M.Y.Ho,
S.Zhang,
D.Williams,
J.H.Golbeck,
P.Fromme,
D.A.Bryant.
The Structure of Photosystem I Acclimated to Far-Red Light Illuminates An Ecologically Important Acclimation Process in Photosynthesis Sci Adv V. 6 Y6415 2020.
ISSN: ESSN 2375-2548
DOI: 10.1126/SCIADV.AAY6415
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