Magnesium in PDB 6pop: Crystal Structure of Daua in Complex with Nadp+

The structure of Crystal Structure of Daua in Complex with Nadp+, PDB code: 6pop was solved by B.Pluvinage, A.B.Boraston, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.85 / 2.15
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	87.687, 232.817, 88.257, 90.00, 119.18, 90.00
R / Rfree (%)	21.4 / 26

The binding sites of Magnesium atom in the Crystal Structure of Daua in Complex with Nadp+ (pdb code 6pop). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Daua in Complex with Nadp+, PDB code: 6pop:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of Daua in Complex with Nadp+


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Daua in Complex with Nadp+ within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg503 b:46.0 occ:1.00 O1A B:NAP501 2.0 40.7 1.0 O B:HOH635 2.4 42.2 1.0 O B:HOH661 2.5 35.9 1.0 O B:HOH643 2.8 34.9 1.0 O B:HOH615 3.0 41.0 1.0 O B:HOH605 3.0 45.3 1.0 O1N B:NAP501 3.4 49.6 1.0 PA B:NAP501 3.5 34.2 1.0 NZ B:LYS175 3.9 41.5 1.0 O5B B:NAP501 4.2 37.3 1.0 O3 B:NAP501 4.2 41.0 1.0 PN B:NAP501 4.3 44.8 1.0 O2A B:NAP501 4.5 34.7 1.0 O3X B:NAP501 4.5 36.0 1.0 O B:HOH642 4.9 32.5 1.0 O1X B:NAP501 4.9 29.6 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of Daua in Complex with Nadp+


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Daua in Complex with Nadp+ within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg502 b:41.4 occ:1.00 O1A C:NAP501 2.2 33.0 1.0 O C:HOH639 2.2 37.7 1.0 O C:HOH699 2.3 41.6 1.0 O C:HOH670 2.4 30.2 1.0 O C:HOH683 2.8 37.0 1.0 O C:HOH604 2.8 38.4 1.0 PA C:NAP501 3.6 30.7 1.0 O1N C:NAP501 3.6 38.7 1.0 O5B C:NAP501 4.0 31.6 1.0 O2N C:NAP501 4.0 32.8 1.0 PN C:NAP501 4.0 38.1 1.0 O C:HOH607 4.2 42.4 1.0 O3 C:NAP501 4.2 37.8 1.0 CE C:LYS175 4.5 41.2 1.0 O3X C:NAP501 4.6 33.1 1.0 NE1 C:TRP147 4.7 28.4 1.0 O2A C:NAP501 4.8 30.3 1.0 O1X C:NAP501 4.9 25.9 1.0 O C:HOH690 5.0 26.9 1.0

A.G.Hettle, J.K.Hobbs, B.Pluvinage, C.Vickers, K.Abe, O.Salama-Alber, B.Mcguire, J.H.Hehemann, J.P.M.Hui, F.Berrue, A.Banskota, J.Zhang, E.Bottos, J.Van Hamme, A.B.Boraston. The Carrageenan Metabolism Pathway of Marine Pseudoalteromonas Species To Be Published.